CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_001271000
(
Globodera pallida
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
GPLIN_001271000
T029346_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_001271000
BED ZF
39
80
SEVWSRFRLEGLNAICLVCNEKLKVGPTRQTSSLWRHLKRHT
Links
Other
BED ZF
family TFs
Other
Globodera pallida
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig829.frz3.gene8
Meloidogyne hapla
MhA1_Contig829.frz3.gene8
N
0.769
maker-nMf.1.1.scaf09382-snap-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf09382-snap-gene-0.5
N
0.769
maker-nMf.1.1.scaf09040-augustus-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf09040-augustus-gene-0.5
N
0.769
Minc01031
Meloidogyne incognita
Minc01031
N
0.769