CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0001987701
(
Heligmosomoides bakeri
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
HPBE_0001987701
T029386_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0001987701-mRNA-1
BED ZF
46
89
SEIWDHYRLLNENQNVECVYCWKVLKRGDSSTKSMWGHMTAFHQ
Links
Other
BED ZF
family TFs
Other
Heligmosomoides bakeri
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI01730700
Haemonchus contortus
HCOI01730700
N
1.000
NBR_0001684501
Nippostrongylus brasiliensis
NBR_0001684501
N
1.000
SVUK_0001376701
Strongylus vulgaris
SVUK_0001376701
N
1.000
SVUK_0002086401
Strongylus vulgaris
SVUK_0002086401
N
1.000
DICVIV_10568
Dictyocaulus viviparus
DICVIV_10568
N
1.000
ANCDUO_16960
Ancylostoma duodenale
ANCDUO_16960
N
0.953
ANCCAN_21647
Ancylostoma caninum
ANCCAN_21647
N
0.953
ANCDUO_12756
Ancylostoma duodenale
ANCDUO_12756
N
0.953
CRE01078
Caenorhabditis remanei
CRE01078
N
0.814
CJA17319
Caenorhabditis japonica
CJA17319
N
0.814