CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT4G05170
(
Arabidopsis thaliana
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AT4G05170
T030667_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Encodes a protein showing similarities to zinc finger transcription factors, involved in regulation of flowering under long days. Acts upstream of FT and SOC1.
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G05170.1
bHLH
191
231
KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQ
AT4G05170.2
bHLH
173
213
KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQ
AT4G05170.3
bHLH
55
95
KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQ
AT4G05170.4
bHLH
173
213
KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQ
AT4G05170.5
bHLH
148
188
KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQ
AT4G05170.6
bHLH
173
213
KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQ
AT4G05170.7
bHLH
173
213
KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQ
Links
Other
bHLH
family TFs
Other
Arabidopsis thaliana
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy