MYOD1 (Anolis carolinensis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSACAG00000000054 T032677_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYOD1
M04116_2.00
Homo sapiens
BAACASSTGNYV

BRNCASSTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1
0.914 0.981
MYOD1
M04117_2.00
Homo sapiens
BRVCASMTGDCG

CGHCAKSTGBYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2
0.914 0.981
MYOD1
M04120_2.00
Homo sapiens
NAACASSTGNYV

BRNCASSTGTTN
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1
0.914 0.981
MYOD1
M04121_2.00
Homo sapiens
BRMCASCTGDCR

YGHCAGSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2
0.914 0.981
Myod1
M08060_2.00
Mus musculus
NVNRRCAGSTGBN

NVCASCTGYYNBN
ChIP-seq
Mathelier et al.(2014)
MA0499.1
0.914 0.981
MYOD1
M08724_2.00
Homo sapiens
NVNNRNRRCAGCTGN

NCAGCTGYYNYNNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A
0.914 0.981
Myod1
M08745_2.00
Mus musculus
NVNRRNRRCAGSTGB

VCASCTGYYNYYNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A
0.914 0.981
MYOD1
M09838_2.00
Homo sapiens
HRVCACCTGHBB

VVDCAGGTGBYD
Transfac
Matys et al.(2006)
V$MYOD_01
0.914 0.981
MYOD1
M09839_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOD_Q6_02
0.914 0.981
MYOD1
M09840_2.00
Homo sapiens
NVCABCTGNY

RNCAGVTGBN
Transfac
Matys et al.(2006)
V$MYOD_Q6
0.914 0.981
MYOD1
M04118_2.00
Homo sapiens
BAACANVTGTYV

BRACABNTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1
0.914 0.981
MYOD1
M04119_2.00
Homo sapiens
BRRCASSTGDCR

YGHCASSTGYYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2
0.914 0.981
MYOD1
M04122_2.00
Homo sapiens
NAMCASSTGBYV

BRVCASSTGKTN
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1
0.914 0.981
MYOD1
M04123_2.00
Homo sapiens
BRMCASVTGNCR

YGNCABSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2
0.914 0.981
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH

DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.866 0.904
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC

GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.866 0.904
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC

GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.866 0.904
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY

RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.866 0.904
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC

GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.866 0.904
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY

RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.840 0.923
MYF5
M09821_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.840 0.923
MYOG
M04098_2.00
Homo sapiens
BRACAGCTGWCR

YGWCAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1
0.839 0.788
MYOG
M04099_2.00
Homo sapiens
NAACAGCTGTYN

NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2
0.839 0.788
MYOG
M04102_2.00
Homo sapiens
NRACARCTGWCR

YGWCAGYTGTYN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1
0.839 0.788
MYOG
M04103_2.00
Homo sapiens
NAACARYTGTYN

NRACARYTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2
0.839 0.788
Myog
M08061_2.00
Mus musculus
RRCAGCTGVNN

NNBCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0500.1
0.839 0.788
MYOG
M08721_2.00
Homo sapiens
BHVCAGCTGYYNB

VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B
0.839 0.788
Myog
M08755_2.00
Mus musculus
BHVCAGCTGYYNB

VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A
0.839 0.788
Myog
M09469_2.00
Mus musculus
RACAGCTG

CAGCTGTY
Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024
0.839 0.788
MYOG
M09829_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01
0.839 0.788
MYOG
M09830_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6
0.839 0.788
MYOG
M04100_2.00
Homo sapiens
BRACAGCTGTCR

YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1
0.839 0.788
MYOG
M04101_2.00
Homo sapiens
BAACAGCTGTYV

BRACAGCTGTTV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2
0.839 0.788
MYOG
M04104_2.00
Homo sapiens
BRACAGCTGTCR

YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1
0.839 0.788
MYOG
M04105_2.00
Homo sapiens
NAACAGCTGTYN

NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2
0.839 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000000053 bHLH 102 153

Links

Other bHLH family TFs
Other Anolis carolinensis TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_206080 Agaricus bisporus AGABI2DRAFT_206080 N 0.000
M378DRAFT_8120 Amanita muscaria M378DRAFT_8120 N 0.000
CERSUDRAFT_93268 Ceriporiopsis subvermispora CERSUDRAFT_93268 N 0.000
FIBRA_08530 Fibroporia radiculosa FIBRA_08530 N 0.000
FOMPIDRAFT_99099 Fomitopsis pinicola FOMPIDRAFT_99099 N 0.000
GALMADRAFT_240824 Galerina marginata GALMADRAFT_240824 N 0.000
GLOTRDRAFT_138211 Gloeophyllum trabeum GLOTRDRAFT_138211 N 0.000
GYMLUDRAFT_244445 Gymnopus luxurians GYMLUDRAFT_244445 N 0.000
M413DRAFT_442898 Hebeloma cylindrosporum M413DRAFT_442898 N 0.000
HETIRDRAFT_478421 Heterobasidion irregulare HETIRDRAFT_478421 N 0.000
JAAARDRAFT_66557 Jaapia argillacea JAAARDRAFT_66557 N 0.000
K443DRAFT_672061 Laccaria amethystina K443DRAFT_672061 N 0.000
LACBIDRAFT_305525 Laccaria bicolor LACBIDRAFT_305525 N 0.000
MPER_01314 Moniliophthora perniciosa MPER_01314 N 0.000
Moror_14084 Moniliophthora roreri Moror_14084 N 0.000
PAXRUDRAFT_832240 Paxillus rubicundulus PAXRUDRAFT_832240 N 0.000
PHACADRAFT_32832 Phanerochaete carnosa PHACADRAFT_32832 N 0.000
fgenesh1_pg.C_scaffold_3000282 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_3000282 N 0.000
PHLGIDRAFT_66452 Phlebiopsis gigantea PHLGIDRAFT_66452 N 0.000
PILCRDRAFT_819897 Piloderma croceum PILCRDRAFT_819897 N 0.000
M404DRAFT_882883 Pisolithus tinctorius M404DRAFT_882883 N 0.000
PLEOSDRAFT_1105666 Pleurotus ostreatus PLEOSDRAFT_1105666 N 0.000
POSPLDRAFT_96456 Postia placenta POSPLDRAFT_96456 N 0.000
POSPLDRAFT_95924 Postia placenta POSPLDRAFT_95924 N 0.000
SCHCODRAFT_245859 Schizophyllum commune SCHCODRAFT_245859 N 0.000
SCLCIDRAFT_1214941 Scleroderma citrinum SCLCIDRAFT_1214941 N 0.000
SERLA73DRAFT_162624 Serpula lacrymans SERLA73DRAFT_162624 N 0.000
CY34DRAFT_808438 Suillus luteus CY34DRAFT_808438 N 0.000