TCF4 (Pteropus vampyrus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSPVAG00000002074 T037094_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tcf4
M01750_2.00
Mus musculus
VCAGVTGBN

NVCABCTGB
PBM
Weirauch et al.(2014)
pTH5101
0.914 1.000
TCF4
M02807_2.00
Homo sapiens
HRCACCTGBN

NVCAGGTGYD
SELEX
Jolma et al.(2013)
TCF4_1
0.914 1.000
TCF4
M02808_2.00
Homo sapiens
NVCACCTBBN

NVVAGGTGBN
SELEX
Jolma et al.(2013)
TCF4_2
0.914 1.000
TCF4
M02728_2.00
Homo sapiens
RCACCTG

CAGGTGY
SELEX
Jolma et al.(2010)
TCF4_dimer
0.914 1.000
TCF4
M04214_2.00
Homo sapiens
VCACCTGB

VCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_HT-SELEX
0.914 1.000
Tcf4
M08775_2.00
Mus musculus
HRCACCTGB

VCAGGTGYD
Misc
Kulakovskiy et al.(2013)
ITF2_MOUSE.H11MO.0.B
0.914 1.000
TCF4
M09461_2.00
Homo sapiens
ASWTCAAAGRVN

NBYCTTTGAWST
Misc
Heinz et al.(2010)
Hct116-Tcf4_SRA012054
0.914 1.000
TCF4
M04215_2.00
Homo sapiens
VCACCTGN

NCAGGTGB
SELEX
Yin et al.(2017)
TCF4_eDBD_Methyl-HT-SELEX
0.914 1.000
Tcf12
M01740_2.00
Mus musculus
NVCAYCTGB

VCAGRTGBN
PBM
Weirauch et al.(2014)
pTH5071
0.912 0.962
TCF12
M04137_2.00
Homo sapiens
VCACSTGB

VCASGTGB
SELEX
Yin et al.(2017)
TCF12_eDBD_HT-SELEX
0.912 0.962
Tcf12
M08062_2.00
Mus musculus
RRCAGCTGNNN

NNNCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0521.1
0.912 0.962
TCF12
M07805_2.00
Homo sapiens
NVDSCAGSTGB

VCASCTGSHBN
ChIP-seq
Gerstein et al.(2012)
GM12878_TCF12_HudsonAlpha
0.912 0.962
TCF12
M07806_2.00
Homo sapiens
VCASCTGB

VCAGSTGB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_TCF12_HudsonAlpha
0.912 0.962
TCF12
M08731_2.00
Homo sapiens
CMCASCTGSH

DSCAGSTGKG
Misc
Kulakovskiy et al.(2013)
HTF4_HUMAN.H11MO.0.A
0.912 0.962
Tcf12
M08762_2.00
Mus musculus
VMCASCTGSH

DSCAGSTGKB
Misc
Kulakovskiy et al.(2013)
HTF4_MOUSE.H11MO.0.A
0.912 0.962
TCF12
M09458_2.00
Homo sapiens
NNVCAGCTGB

VCAGCTGBNN
Misc
Heinz et al.(2010)
GM12878-Tcf12_GSE32465
0.912 0.962
TCF12
M09858_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEB_Q6
0.912 0.962
TCF12
M09859_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HTF4_Q2
0.912 0.962
TCF12
M09860_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_01
0.912 0.962
TCF12
M09861_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_03
0.912 0.962
TCF12
M09862_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TCF12_05
0.912 0.962
TCF12
M04138_2.00
Homo sapiens
NCAYCTGN

NCAGRTGN
SELEX
Yin et al.(2017)
TCF12_eDBD_Methyl-HT-SELEX
0.912 0.962
Tcf3
M00753_2.00
Mus musculus
VCACCTGBN

NVCAGGTGB
PBM
Weirauch et al.(2013)
pTH3866
0.912 0.885
Tcf3
M01723_2.00
Mus musculus
NNVCACSTGB

VCASGTGBNN
PBM
Weirauch et al.(2014)
pTH4580
0.912 0.885
Tcf3
M00118_2.00
Mus musculus
VCAYCTGB

VCAGRTGB
PBM
Badis et al.(2009)
Tcfe2a_3865
0.912 0.885
Tcf3
M09465_2.00
Mus musculus
ABWTCAAAGS

SCTTTGAWVT
Misc
Heinz et al.(2010)
mES-Tcf3_GSE11724
0.884 0.923
Tcf3
M09466_2.00
Mus musculus
VCAGCTGBNN

NNVCAGCTGB
Misc
Heinz et al.(2010)
proBcell-E2A_GSE21978
0.884 0.923
Tcf3
M09886_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E47_05
0.884 0.923
TCF3
M02775_2.00
Homo sapiens
NVCACCTGBN

NVCAGGTGBN
SELEX
Jolma et al.(2013)
TCF3_1
0.884 0.885
TCF3
M08710_2.00
Homo sapiens
VVCASCTGCHN

NDGCAGSTGBB
Misc
Kulakovskiy et al.(2013)
TFE2_HUMAN.H11MO.0.A
0.884 0.885
TCF3
M09791_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E12_Q6
0.884 0.885
TCF3
M09792_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_01
0.884 0.885
TCF3
M09793_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2A_Q6_02
0.884 0.885
TCF3
M09794_2.00
Homo sapiens
VVVVMCACCTGCNBB

VVNGCAGGTGKBBBB
Transfac
Matys et al.(2006)
V$E47_01
0.884 0.885
TCF3
M09795_2.00
Homo sapiens
NNKWRCACCTGYDNNN

NNNHRCAGGTGYWMNN
Transfac
Matys et al.(2006)
V$E47_02
0.884 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000001962 bHLH 625 678

Links

Other bHLH family TFs
Other Pteropus vampyrus TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL010925 Aedes aegypti AAEL010925 I 0.000
AALB009947 Anopheles albimanus AALB009947 I 0.000
AARA006326 Anopheles arabiensis AARA006326 I 0.000
ACEP12187 Atta cephalotes ACEP12187 I 0.000
ACHR006794 Anopheles christyi ACHR006794 I 0.000
ACOM041695 Anopheles coluzzii ACOM041695 I 0.000
ACUA001543 Anopheles culicifacies ACUA001543 I 0.000
AEPI007009 Anopheles epiroticus AEPI007009 I 0.000
AFAF006302 Anopheles farauti AFAF006302 I 0.000
AFUN006149 Anopheles funestus AFUN006149 I 0.000
AGAP010511 Anopheles gambiae AGAP010511 I 0.000
ALUE_0001693901 Ascaris lumbricoides ALUE_0001693901 I 0.000
AMAM005702 Anopheles maculatus AMAM005702 I 0.000
AMEC009624 Anopheles melas AMEC009624 I 0.000
AMIN001256 Anopheles minimus AMIN001256 I 0.000
ANCDUO_13359 Ancylostoma duodenale ANCDUO_13359 I 0.000
ANCDUO_18278 Ancylostoma duodenale ANCDUO_18278 I 0.000
AQUA001309 Anopheles quadriannulatus AQUA001309 I 0.000
ASTEI07121 Anopheles stephensi ASTEI07121 I 0.000
BGIBMGA001382 Bombyx mori BGIBMGA001382 I 0.000
Cflo_11261--XP_001120126.1_APIME Camponotus floridanus Cflo_11261--XP_001120126.1_APIME I 0.000
CJA08385 Caenorhabditis japonica CJA08385 I 0.000
CLEC013393 Cimex lectularius CLEC013393 I 0.000
CPIJ008336 Culex quinquefasciatus CPIJ008336 I 0.000
CPIJ016459 Culex quinquefasciatus CPIJ016459 I 0.000
CpipJ_CPIJ008336 Culex pipiens CpipJ_CPIJ008336 I 0.000
CpipJ_CPIJ016459 Culex pipiens CpipJ_CPIJ016459 I 0.000
D917_02561 Trichinella nativa D917_02561 I 0.000
D918_07967 Trichuris suis D918_07967 I 0.000
DAPPUDRAFT_8703 Daphnia pulex DAPPUDRAFT_8703 I 0.000
EFV60876 Trichinella spiralis EFV60876 I 0.000
SRF Choloepus hoffmanni ENSCHOG00000008671 I 0.000
ENSCSAVG00000008682 Ciona savignyi ENSCSAVG00000008682 I 0.000
SRF Oryzias latipes ENSORLG00000013036 I 0.000
ENSXMAG00000018559 Xiphophorus maculatus ENSXMAG00000018559 I 0.000
bs Drosophila melanogaster FBgn0004101 D 0.000
GA17433 Drosophila pseudoobscura FBgn0077446 I 0.000
GF11392 Drosophila ananassae FBgn0088432 I 0.000
GG22961 Drosophila erecta FBgn0115118 I 0.000
GH20989 Drosophila grimshawi FBgn0128451 I 0.000
GI21322 Drosophila mojavensis FBgn0144052 I 0.000
GL20046 Drosophila persimilis FBgn0157643 I 0.000
GM11854 Drosophila sechellia FBgn0166795 I 0.000
GD11852 Drosophila simulans FBgn0183591 I 0.000
GJ21595 Drosophila virilis FBgn0208714 I 0.000
GK22205 Drosophila willistoni FBgn0224190 I 0.000
GE14398 Drosophila yakuba FBgn0232006 I 0.000
fgenesh2_pg.scaffold_196000035 Branchiostoma floridae fgenesh2_pg.scaffold_196000035 I 0.000
fgenesh2_pg.scaffold_8000100 Branchiostoma floridae fgenesh2_pg.scaffold_8000100 I 0.000
GB47234 Apis mellifera GB47234 I 0.000
GLOINDRAFT_82941 Rhizophagus irregularis GLOINDRAFT_82941 I 0.000
HelroG137972 Helobdella robusta HelroG137972 I 0.000
HHAL001484-PA Halyomorpha halys HHAL001484-PA I 0.000
HMEL017831 Heliconius melpomene HMEL017831 I 0.000
Hsal_11632--XP_001120126.1_APIME Harpegnathos saltator Hsal_11632--XP_001120126.1_APIME I 0.000
ISCW019966 Ixodes scapularis ISCW019966 I 0.000
KGM_22252 Danaus plexippus KGM_22252 I 0.000
L596_g5274 Steinernema carpocapsae L596_g5274 I 0.000
L798_08800 Zootermopsis nevadensis L798_08800 I 0.000
L889_g24087 Steinernema feltiae L889_g24087 I 0.000
L892_g14520 Steinernema scapterisci L892_g14520 I 0.000
L893_g14743 Steinernema glaseri L893_g14743 I 0.000
L898_g9834 Steinernema monticolum L898_g9834 I 0.000
LCUP011662 Lucilia cuprina LCUP011662 I 0.000
LDEC007646 Leptinotarsa decemlineata LDEC007646 I 0.000
MDOA002443 Musca domestica MDOA002443 I 0.000
MESCA004860 Megaselia scalaris MESCA004860 I 0.000
NV18787 Nasonia vitripennis NV18787 I 0.000
OFLC_0001346401 Onchocerca flexuosa OFLC_0001346401 I 0.000
PPAI006358 Phlebotomus papatasi PPAI006358 I 0.000
RO3G_00948 Rhizopus oryzae RO3G_00948 I 0.000
RPRC001752 Rhodnius prolixus RPRC001752 I 0.000
RSKR_0001102000 Rhabditophanes kr3021 RSKR_0001102000 I 0.000
Sakowv30019106m.g Saccoglossus kowalevskii Sakowv30019106m.g I 0.000
SBAD_0000850501 Soboliphyme baturini SBAD_0000850501 I 0.000
SINV23963 Solenopsis invicta SINV23963 I 0.000
SMAR003014 Strigamia maritima SMAR003014 I 0.000
SPPG_06208 Spizellomyces punctatus SPPG_06208 I 0.000
TMUE_s0092001100 Trichuris muris TMUE_s0092001100 I 0.000
TTRE_0000468501 Trichuris trichiura TTRE_0000468501 I 0.000
YQE_03076 Dendroctonus ponderosae YQE_03076 I 0.000