neurod6b (Takifugu rubripes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTRUG00000012378 T037888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEUROD1
M04148_2.00
Homo sapiens
RMCATATGKYVNNNTAWTT

AAWTANNNBRMCATATGKY
SELEX
Yin et al.(2017)
NEUROD1_FL_HT-SELEX
0.890 0.904
NEUROD1
M08057_2.00
Homo sapiens
NNVCAGATGGNNN

NNNCCATCTGBNN
ChIP-seq
Mathelier et al.(2014)
MA1109.1
0.890 0.904
NEUROD1
M08735_2.00
Homo sapiens
RVCAGATGGY

RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_HUMAN.H11MO.0.A
0.890 0.904
Neurod1
M08764_2.00
Mus musculus
RVCAGATGGY

RCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF1_MOUSE.H11MO.0.A
0.890 0.904
Neurod1
M09474_2.00
Mus musculus
RVCAGATGGY

RCCATCTGBY
Misc
Heinz et al.(2010)
Islet-NeuroD1_GSE30298
0.890 0.904
NEUROD1
M09873_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_01
0.890 0.904
NEUROD1
M09874_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NEUROD_02
0.890 0.904
NEUROD1
M04149_2.00
Homo sapiens
RVCATATGBYVYNBTAWTW

WAWTAVNRBRVCATATGBY
SELEX
Yin et al.(2017)
NEUROD1_FL_Methyl-HT-SELEX
0.890 0.904
NEUROD2
M02795_2.00
Homo sapiens
RVCATATGKY

RMCATATGBY
SELEX
Jolma et al.(2013)
NEUROD2_1
0.855 0.904
NEUROD2
M04160_2.00
Homo sapiens
RVCATATGKY

RMCATATGBY
SELEX
Yin et al.(2017)
NEUROD2_FL_HT-SELEX
0.855 0.904
NEUROD2
M08737_2.00
Homo sapiens
RRCAGMTGG

CCAKCTGYY
Misc
Kulakovskiy et al.(2013)
NDF2_HUMAN.H11MO.0.B
0.855 0.904
Neurod2
M08770_2.00
Mus musculus
RVCAGATGGB

VCCATCTGBY
Misc
Kulakovskiy et al.(2013)
NDF2_MOUSE.H11MO.0.A
0.855 0.904
NEUROD2
M04161_2.00
Homo sapiens
RMCATATGBY

RVCATATGKY
SELEX
Yin et al.(2017)
NEUROD2_FL_Methyl-HT-SELEX
0.855 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000031348 bHLH 91 143
ENSTRUP00000031349 bHLH 45 97

Links

Other bHLH family TFs
Other Takifugu rubripes TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000007290 Ailuropoda melanoleuca ENSAMEG00000007290 N 0.000
Mterf3 Rattus norvegicus ENSRNOG00000004492 N 0.000
MTERF3 Pan troglodytes ENSPTRG00000020441 N 0.000
ENSPSIG00000005026 Pelodiscus sinensis ENSPSIG00000005026 N 0.000
ENSPPYG00000018764 Pongo abelii ENSPPYG00000018764 N 0.000
MTERF3 Procavia capensis ENSPCAG00000009302 N 0.000
ENSPANG00000000418 Papio anubis ENSPANG00000000418 N 0.000
MTERF3 Otolemur garnettii ENSOGAG00000004303 N 0.000
MTERF3 Oryctolagus cuniculus ENSOCUG00000004276 N 0.000
ENSSHAG00000005026 Sarcophilus harrisii ENSSHAG00000005026 N 0.000
MTERF3 Sus scrofa ENSSSCG00000006090 N 0.000
Myotis_brandtii_MTERFD1_10032119 Myotis brandtii Myotis_brandtii_MTERFD1_10032119 N 0.000
ENSP00000287025 Macaca fascicularis ENSP00000287025 N 0.000
ENSBTAP00000001994-D1 Bos grunniens ENSBTAP00000001994-D1 N 0.000
Cmyd_10010214 Chelonia mydas Cmyd_10010214 N 0.000
MTERF3 Vicugna pacos ENSVPAG00000004132 N 0.000
MTERF3 Tursiops truncatus ENSTTRG00000007349 N 0.000
MTERF3 Tupaia belangeri ENSTBEG00000002615 N 0.000
ENSSTOG00000008021 Ictidomys tridecemlineatus ENSSTOG00000008021 N 0.000
ENSOARG00000005313 Ovis aries ENSOARG00000005313 N 0.000
Mterf3 Mus musculus ENSMUSG00000021519 N 0.000
Mterf3 Dipodomys ordii ENSDORG00000010477 N 0.000
MTERF3 Dasypus novemcinctus ENSDNOG00000041739 N 0.000
ENSCSAG00000012442 Chlorocebus sabaeus ENSCSAG00000012442 N 0.000
MTERF3 Cavia porcellus ENSCPOG00000003487 N 0.000
MTERF3 Callithrix jacchus ENSCJAG00000020561 N 0.000
MTERF3 Choloepus hoffmanni ENSCHOG00000007893 N 0.000
MTERF3 Canis familiaris ENSCAFG00000009460 N 0.000
MTERF3 Bos taurus ENSBTAG00000001522 N 0.000
MTERF3 Equus caballus ENSECAG00000012943 N 0.000
MTERF3 Echinops telfairi ENSETEG00000011372 N 0.000
ENSMPUG00000008759 Mustela putorius furo ENSMPUG00000008759 N 0.000
MTERF3 Monodelphis domestica ENSMODG00000006966 N 0.000
MTERF3 Macaca mulatta ENSMMUG00000008808 N 0.000
MTERF3 Myotis lucifugus ENSMLUG00000007186 N 0.000
MTERF3 Loxodonta africana ENSLAFG00000002544 N 0.000
MTERF3 Gorilla gorilla ENSGGOG00000011535 N 0.000
MTERF3 Homo sapiens ENSG00000156469 N 0.000
MTERF3 Felis catus ENSFCAG00000028511 N 0.000
mterf3 Xenopus tropicalis XB-GENE-6454740 N 0.000