GSMUA_Achr9G28050_001 (Musa acuminata)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GSMUA_Achr9G28050_001 T040246_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fgenesh1_pg.scaffold_37000071
M01757_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8584
0.899 0.843
BIM1
M01710_2.00
Arabidopsis thaliana
NCRCGTGNNN

NNNCACGYGN
PBM
Weirauch et al.(2014)
pTH8114
0.871 0.863
BIM1
M06739_2.00
Arabidopsis thaliana
CACGTGAYNHNNNH

DNNNDNRTCACGTG
Dap-seq
OMalley et al.(2016)
BIM1_col_a
0.871 0.863
BIM1
M06740_2.00
Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN

NNNDNDNDNDDRKCACGTGMBN
Dap-seq
OMalley et al.(2016)
BIM1_colamp_a
0.871 0.863
BIM1
M09787_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BIM1_01
0.871 0.863
BIM2
M01701_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8089
0.851 0.784
BIM2
M06727_2.00
Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN

NNNNNNNNNNNVDCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_colamp
0.851 0.784
BIM2
M06728_2.00
Arabidopsis thaliana
CACGTGMBNNNCVYV

BRBGNNNVKCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_col_v3b
0.851 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr9P28050_001 bHLH 227 284

Links

Other bHLH family TFs
Other Musa acuminata TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT3G04930 Arabidopsis thaliana AT3G04930 D 0.000
PK20442.1 Cannabis sativa PK20442.1 D 0.000
LjB12P21.40.nc Lotus japonicus LjB12P21.40.nc I 0.000
evm.TU.supercontig_264.16 Carica papaya evm.TU.supercontig_264.16 I 0.000
Eucgr.H04388 Eucalyptus grandis Eucgr.H04388 I 0.000
Ciclev10001378m.g Citrus clementina Ciclev10001378m.g I 0.000
Carubv10013683m.g Capsella rubella Carubv10013683m.g I 0.000
Carubv10001022m.g Capsella rubella Carubv10001022m.g I 0.000
Cagra.2179s0002 Capsella grandiflora Cagra.2179s0002 I 0.000
Cagra.1554s0002 Capsella grandiflora Cagra.1554s0002 I 0.000
Bostr.29827s0034 Boechera stricta Bostr.29827s0034 I 0.000
Aquca_026_00251 Aquilegia coerulea Aquca_026_00251 I 0.000
Aquca_003_00290 Aquilegia coerulea Aquca_003_00290 I 0.000
mgf017918m Mimulus guttatus mgf017918m I 0.000
gene16487-v1.0-hybrid Fragaria vesca gene16487-v1.0-hybrid I 0.000
Gorai.007G285700 Gossypium raimondii Gorai.007G285700 I 0.000
Gorai.013G121800 Gossypium raimondii Gorai.013G121800 I 0.000
Thhalv10020724m.g Eutrema salsugineum Thhalv10020724m.g I 0.000
Thhalv10005455m.g Eutrema salsugineum Thhalv10005455m.g I 0.000
SapurV1A.0276s0160 Salix purpurea SapurV1A.0276s0160 I 0.000
SapurV1A.0027s0820 Salix purpurea SapurV1A.0027s0820 I 0.000
orange1.1g014693m.g Citrus sinensis orange1.1g014693m.g I 0.000
MDP0000931426 Malus domestica MDP0000931426 I 0.000
MDP0000290147 Malus domestica MDP0000290147 I 0.000
MDP0000274864 Malus domestica MDP0000274864 I 0.000
Lus10019007.g Linum usitatissimum Lus10019007.g I 0.000
Lus10015944.g Linum usitatissimum Lus10015944.g I 0.000
Lus10000940.g Linum usitatissimum Lus10000940.g I 0.000
Cucsa.288940 Cucumis sativus Cucsa.288940 I 0.000
cassava22731.valid.m1 Manihot esculenta cassava22731.valid.m1 I 0.000
GLYMA19G43180 Glycine max GLYMA19G43180 I 0.000
GLYMA10G30160 Glycine max GLYMA10G30160 I 0.000
GLYMA05G14455 Glycine max GLYMA05G14455 I 0.000
GLYMA03G40520 Glycine max GLYMA03G40520 I 0.000
fgenesh2_kg.6__2771__AT5G28040.1 Arabidopsis lyrata fgenesh2_kg.6__2771__AT5G28040.1 I 0.000
fgenesh2_kg.3__469__AT3G04930.1 Arabidopsis lyrata fgenesh2_kg.3__469__AT3G04930.1 I 0.000
Bra040416 Brassica rapa Bra040416 I 0.000
Bra009986 Brassica rapa Bra009986 I 0.000
Bo7g093330 Brassica oleracea Bo7g093330 I 0.000
Bo5g146880 Brassica oleracea Bo5g146880 I 0.000
Bo1g151840 Brassica oleracea Bo1g151840 I 0.000
AT5G28040 Arabidopsis thaliana AT5G28040 I 0.000
GLYMA20G37240 Glycine max GLYMA20G37240 I 0.000
MTR_7g114600 Medicago truncatula MTR_7g114600 I 0.000
30128.m008635 Ricinus communis 30128.m008635 I 0.000
Cla011457 Citrullus lanatus Cla011457 I 0.000
Ca_03737 Cicer arietinum Ca_03737 I 0.000
Ca_01216 Cicer arietinum Ca_01216 I 0.000
TCM_026408 Theobroma cacao TCM_026408 I 0.000
Solyc02g083750.1 Solanum lycopersicum Solyc02g083750.1 I 0.000
Solyc01g097890.2 Solanum lycopersicum Solyc01g097890.2 I 0.000
PRUPE_ppa006905mg Prunus persica PRUPE_ppa006905mg I 0.000
POPTR_1258s00200 Populus trichocarpa POPTR_1258s00200 I 0.000
POPTR_0001s26910 Populus trichocarpa POPTR_0001s26910 I 0.000
PGSC0003DMG400022471 Solanum tuberosum PGSC0003DMG400022471 I 0.000
PGSC0003DMG400003572 Solanum tuberosum PGSC0003DMG400003572 I 0.000
AMTR_s00045p00124580 Amborella trichopoda AMTR_s00045p00124580 I 0.000