CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0007s14480
(
Populus trichocarpa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
POPTR_0007s14480
T043837_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.876
0.771
OS01G0235700
M09894_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.848
0.562
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0007s14480.1
bHLH
179
226
QDHIMAERKRREKLSQQFIALSALVPGLKKMDKASVLDGAMKYMKQLQ
Links
Other
bHLH
family TFs
Other
Populus trichocarpa
TFs
332 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy