POPTR_0014s06190 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0014s06190 T043893_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.884 0.980
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s06190.1 bHLH 294 342
POPTR_0014s06190.2 bHLH 294 333

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10028175.g Linum usitatissimum Lus10028175.g I 0.914
SapurV1A.0248s0190 Salix purpurea SapurV1A.0248s0190 I 0.914
TCM_005607 Theobroma cacao TCM_005607 I 0.884
Gorai.007G088300 Gossypium raimondii Gorai.007G088300 I 0.884
UNE10 Vitis vinifera VIT_15s0021g02690 I 0.884
orange1.1g012387m.g Citrus sinensis orange1.1g012387m.g I 0.884
Thhalv10028687m.g Eutrema salsugineum Thhalv10028687m.g I 0.884
POPTR_0002s14430 Populus trichocarpa POPTR_0002s14430 I 0.884
PRUPE_ppa005629mg Prunus persica PRUPE_ppa005629mg I 0.884
UNE10 Arabidopsis lyrata scaffold_604304.1 I 0.884
Ca_22883 Cicer arietinum Ca_22883 I 0.884
Solyc01g090790.2 Solanum lycopersicum Solyc01g090790.2 I 0.884
cassava13956.valid.m1 Manihot esculenta cassava13956.valid.m1 I 0.884
gene25546-v1.0-hybrid Fragaria vesca gene25546-v1.0-hybrid I 0.884
Ciclev10020053m.g Citrus clementina Ciclev10020053m.g I 0.884
Eucgr.D02499 Eucalyptus grandis Eucgr.D02499 I 0.884
evm.TU.supercontig_212.3 Carica papaya evm.TU.supercontig_212.3 I 0.884
SapurV1A.0033s0400 Salix purpurea SapurV1A.0033s0400 I 0.884
Carubv10001567m.g Capsella rubella Carubv10001567m.g I 0.884
PGSC0003DMG400025976 Solanum tuberosum PGSC0003DMG400025976 I 0.884
Aquca_035_00175 Aquilegia coerulea Aquca_035_00175 I 0.884
Bostr.14547s0014 Boechera stricta Bostr.14547s0014 I 0.884
Cagra.20893s0010 Capsella grandiflora Cagra.20893s0010 I 0.884
30174.m008814 Ricinus communis 30174.m008814 I 0.884
Gorai.008G106900 Gossypium raimondii Gorai.008G106900 I 0.884
Bra037312 Brassica rapa Bra037312 I 0.884
GLYMA01G32890 Glycine max GLYMA01G32890 I 0.884
GLYMA03G04000 Glycine max GLYMA03G04000 I 0.884
Bra000560 Brassica rapa Bra000560 I 0.884
Bo3g054850 Brassica oleracea Bo3g054850 I 0.884
PK20816.1 Cannabis sativa PK20816.1 I 0.884
UNE10 Arabidopsis thaliana AT4G00050 D 0.884
Bo3g042120 Brassica oleracea Bo3g042120 I 0.884
MDP0000439540 Malus domestica MDP0000439540 I 0.884
GLYMA11G17120 Glycine max GLYMA11G17120 I 0.884
mgf005431m Mimulus guttatus mgf005431m I 0.871
GLYMA01G15930 Glycine max GLYMA01G15930 I 0.871
GSMUA_Achr3G10120_001 Musa acuminata GSMUA_Achr3G10120_001 I 0.870
GSMUA_Achr9G18080_001 Musa acuminata GSMUA_Achr9G18080_001 I 0.870
cassava19894.m1 Manihot esculenta cassava19894.m1 I 0.860
PGSC0003DMG400024554 Solanum tuberosum PGSC0003DMG400024554 I 0.849
GSMUA_Achr8G11070_001 Musa acuminata GSMUA_Achr8G11070_001 I 0.849
Solyc03g115540.1 Solanum lycopersicum Solyc03g115540.1 I 0.849
Solyc10g018510.1 Solanum lycopersicum Solyc10g018510.1 I 0.848
gene26073-v1.0-hybrid Fragaria vesca gene26073-v1.0-hybrid I 0.846
OBART10G18190 Oryza barthii OBART10G18190 I 0.846
BRADI3G33170 Brachypodium distachyon BRADI3G33170 I 0.846
PRUPE_ppa022963mg Prunus persica PRUPE_ppa022963mg I 0.846
PK15531.1 Cannabis sativa PK15531.1 I 0.846
BGIOSGA031426 Oryza indica BGIOSGA031426 I 0.846
evm.TU.supercontig_1213.3 Carica papaya evm.TU.supercontig_1213.3 I 0.846
OS10G0556200 Oryza sativa OS10G0556200 I 0.846
Eucgr.K02496 Eucalyptus grandis Eucgr.K02496 I 0.846
ORGLA10G0133200 Oryza glaberrima ORGLA10G0133200 I 0.846
OPUNC10G16560 Oryza punctata OPUNC10G16560 I 0.846
Pavir.J18019 Panicum virgatum Pavir.J18019 I 0.846
MDP0000288670 Malus domestica MDP0000288670 I 0.846
Traes_1AL_914726769 Triticum aestivum Traes_1AL_914726769 I 0.846
AMTR_s00106p00127480 Amborella trichopoda AMTR_s00106p00127480 I 0.846
Pavir.Ia02188 Panicum virgatum Pavir.Ia02188 I 0.846
TCM_014141 Theobroma cacao TCM_014141 I 0.846
Si035334m.g Setaria italica Si035334m.g I 0.846
PIF7 Vitis vinifera VIT_17s0000g06930 I 0.846
GLYMA06G21495 Glycine max GLYMA06G21495 I 0.846
OB10G25310 Oryza brachyantha OB10G25310 I 0.846
Gorai.001G078500 Gossypium raimondii Gorai.001G078500 I 0.846
30138.m004021 Ricinus communis 30138.m004021 I 0.846
Pm024836 Prunus mume Pm024836 I 0.846
cassava46185.m1 Manihot esculenta cassava46185.m1 I 0.846
Gorai.007G118100 Gossypium raimondii Gorai.007G118100 I 0.845
orange1.1g038097m.g Citrus sinensis orange1.1g038097m.g I 0.845
Gorai.001G148300 Gossypium raimondii Gorai.001G148300 I 0.845
TCM_004959 Theobroma cacao TCM_004959 I 0.845
Ciclev10019786m.g Citrus clementina Ciclev10019786m.g I 0.845
SapurV1A.0321s0050 Salix purpurea SapurV1A.0321s0050 I 0.845
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.841
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.841
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.841
Si000845m.g Setaria italica Si000845m.g I 0.841
Si012401m.g Setaria italica Si012401m.g I 0.841
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.841
VIT_11s0016g00380 Vitis vinifera VIT_11s0016g00380 I 0.840
TCM_037455 Theobroma cacao TCM_037455 I 0.840
SELMODRAFT_425336 Selaginella moellendorffii SELMODRAFT_425336 I 0.840
BRADI3G46200 Brachypodium distachyon BRADI3G46200 I 0.840
Aquca_020_00579 Aquilegia coerulea Aquca_020_00579 I 0.840
orange1.1g010045m.g Citrus sinensis orange1.1g010045m.g I 0.840
Gorai.009G038500 Gossypium raimondii Gorai.009G038500 I 0.840
evm.TU.supercontig_82.59 Carica papaya evm.TU.supercontig_82.59 I 0.840
Ciclev10008008m.g Citrus clementina Ciclev10008008m.g I 0.840
AMTR_s00129p00124210 Amborella trichopoda AMTR_s00129p00124210 I 0.840
Carubv10023299m.g Capsella rubella Carubv10023299m.g N 0.839