CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RPRC009735
(
Rhodnius prolixus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
RPRC009735
T044275_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nau
M03600_2.00
Drosophila melanogaster
DBAACAGCTGTYVH
DBRACAGCTGTTVH
SELEX
Nitta et al.(2015)
nau_1
0.884
0.923
nau
M03601_2.00
Drosophila melanogaster
NBRACAGCTGACRC
GYGTCAGCTGTYVN
SELEX
Nitta et al.(2015)
nau_2
0.884
0.923
nau
M03602_2.00
Drosophila melanogaster
RCGWCAGCTGWCGC
GCGWCAGCTGWCGY
SELEX
Nitta et al.(2015)
nau_3
0.884
0.923
nau
M05949_2.00
Drosophila melanogaster
CACCTGYY
RRCAGGTG
B1H
Zhu et al.(2011)
nau_da_SANGER_5_FBgn0002922
0.884
0.923
nau
M05950_2.00
Drosophila melanogaster
RACASCTGACGC
GCGTCAGSTGTY
B1H
Zhu et al.(2011)
nau_SANGER_5_FBgn0002922
0.884
0.923
Myf6
M00120_2.00
Mus musculus
NCRNNTGNY
RNCANNYGN
PBM
Badis et al.(2009)
Myf6_3824
0.844
0.827
Myf6
M01742_2.00
Mus musculus
RACAGHTGH
DCADCTGTY
PBM
Weirauch et al.(2014)
pTH5099
0.844
0.827
MYF6
M02780_2.00
Homo sapiens
AACARCTGTY
RACAGYTGTT
SELEX
Jolma et al.(2013)
MYF6_1
0.844
0.827
MYF6
M04084_2.00
Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1
0.844
0.827
MYF6
M04085_2.00
Homo sapiens
NRACASSTGWYV
BRWCASSTGTYN
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2
0.844
0.827
MYF6
M05831_2.00
Homo sapiens
BRACAKNTGNY
RNCANMTGTYV
SMiLE-seq
Isakova et al.(2017)
MYF6
0.844
0.827
MYF6
M08717_2.00
Homo sapiens
CASCTGC
GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C
0.844
0.827
Myf6
M08767_2.00
Mus musculus
CASCTGC
GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C
0.844
0.827
MYF6
M09820_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MRF4_Q3
0.844
0.827
MYF6
M04086_2.00
Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1
0.844
0.827
MYF6
M04087_2.00
Homo sapiens
BAACASSTGWYV
BRWCASSTGTTV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2
0.844
0.827
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RPRC009735-PA
bHLH
132
183
RRKAATLRERRRLRKVNEAFEVLKRRTSANPSQRLPKVEILRNAIEYIESLE
Links
Other
bHLH
family TFs
Other
Rhodnius prolixus
TFs
171 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy