Solyc06g008030.2 (Solanum lycopersicum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Solyc06g008030.2 T045080_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PIF1
M01703_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8733
0.881 0.940
PIF1
M08404_2.00
Arabidopsis thaliana
NCACGTGWSNYNHH

DDNRNSWCACGTGN
ChIP-chip
Mathelier et al.(2014)
MA0552.1
0.881 0.940
PIF1
M09783_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PIF1_01
0.881 0.940
PIF3
M00854_2.00
Arabidopsis thaliana
CACGTGSNN

NNSCACGTG
PBM
Franco-Zorrilla et al.(2014)
PIF3
0.871 0.900
PIF3
M00722_2.00
Arabidopsis thaliana
NCACRTN

NAYGTGN
PBM
Chang et al.(2013)
pTH8200
0.871 0.900
PK05451.1
M01120_2.00
Cannabis sativa
YCACGTGM

KCACGTGR
PBM
Lambert et al.(2019)
pTH10100
0.871 0.900
PIF3
M08045_2.00
Arabidopsis thaliana
HCACGTGGVH

DBCCACGTGD
ChIP-seq
Mathelier et al.(2014)
MA0560.1
0.871 0.900
PIF3
M09780_2.00
Arabidopsis thaliana
BDRRRVCACGTGRVSHCD

HGDSBYCACGTGBYYYHV
Transfac
Matys et al.(2006)
P$PIF3_01
0.871 0.900
PIF3
M09781_2.00
Arabidopsis thaliana
DDDVCCACGTGGVMVNB

VNBKBCCACGTGGBHHH
Transfac
Matys et al.(2006)
P$PIF3_02
0.871 0.900
PIF4
M08046_2.00
Arabidopsis thaliana
CACGTGSV

BSCACGTG
ChIP-seq
Mathelier et al.(2014)
MA0561.1
0.868 0.860
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS

SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.855 0.840
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV

BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.855 0.840
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN

NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.847 0.840
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.842 0.620
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG

CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.842 0.580
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc06g008030.2.1 bHLH 304 353

Links

Other bHLH family TFs
Other Solanum lycopersicum TFs

468 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSCSAG00000001149 Chlorocebus sabaeus ENSCSAG00000001149 I 0.000
ENSDORG00000003572 Dipodomys ordii ENSDORG00000003572 I 0.000
ENSMPUG00000014134 Mustela putorius furo ENSMPUG00000014134 I 0.000
ENSNLEG00000012184 Nomascus leucogenys ENSNLEG00000012184 I 0.000
ENSOARG00000020260 Ovis aries ENSOARG00000020260 I 0.000
ENSP00000361791 Macaca fascicularis ENSP00000361791 I 0.000
ENSP00000361791-D1 Bos grunniens ENSP00000361791-D1 I 0.000
ENSPANG00000006664 Papio anubis ENSPANG00000006664 I 0.000
ENSPPYG00000001488 Pongo abelii ENSPPYG00000001488 I 0.000
ENSSSCG00000020933 Sus scrofa ENSSSCG00000020933 I 0.000
ENSSTOG00000009229 Ictidomys tridecemlineatus ENSSTOG00000009229 I 0.000
ZFP69 Sorex araneus ENSSARG00000003615 I 0.000
ZFP69 Pteropus vampyrus ENSPVAG00000010052 I 0.000
ZFP69 Tupaia belangeri ENSTBEG00000015175 I 0.000
ZFP69 Pan troglodytes ENSPTRG00000000591 I 0.000
ZFP69 Tursiops truncatus ENSTTRG00000012944 I 0.000
ZFP69 Vicugna pacos ENSVPAG00000003028 I 0.000
ZFP69 Ochotona princeps ENSOPRG00000001507 I 0.000
ZFP69 Otolemur garnettii ENSOGAG00000009257 I 0.000
ZFP69 Choloepus hoffmanni ENSCHOG00000009413 I 0.000
ZFP69 Callithrix jacchus ENSCJAG00000002953 I 0.000
ZFP69 Dasypus novemcinctus ENSDNOG00000007479 I 0.000
ZFP69 Felis catus ENSFCAG00000026784 I 0.000
ZFP69 Homo sapiens ENSG00000187815 D 0.000
ZFP69 Gorilla gorilla ENSGGOG00000006972 I 0.000
ZFP69 Microcebus murinus ENSMICG00000007201 I 0.000
ZFP69 Macaca mulatta ENSMMUG00000016199 I 0.000
Zfp69 Mus musculus ENSMUSG00000064141 I 0.000
ZFP69 Oryctolagus cuniculus ENSOCUG00000016000 I 0.000
ZFP69 Bos taurus ENSBTAG00000039287 I 0.000
ZFP69B Sus scrofa ENSSSCG00000003981 I 0.000