TCM_006602 (Theobroma cacao)

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 TCM_006602 T045348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Arabidopsis thaliana Transfac license required
Transfac license required
Matys et al.(2006)
0.864 0.837
Arabidopsis thaliana Transfac license required
Transfac license required
Matys et al.(2006)
0.857 0.755
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX97629 bHLH 351 399


Other bHLH family TFs
Other Theobroma cacao TFs

262 Related TFs

Name Species Gene ID Motif Evidence SR
30147.m014419 Ricinus communis 30147.m014419 I 0.857
30198.m000869 Ricinus communis 30198.m000869 I 0.847
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.857
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.851
Aquca_018_00039 Aquilegia coerulea Aquca_018_00039 I 0.847
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.881
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.878
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.857
SCRM2 Arabidopsis thaliana AT1G12860 I 0.857
AMS Arabidopsis thaliana AT2G16910 D 0.864
SCRM Arabidopsis thaliana AT3G26744 D 0.857
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.857
BGIOSGA007229 Oryza indica BGIOSGA007229 I 0.848
BGIOSGA015389 Oryza indica BGIOSGA015389 N 0.839
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.857
BGIOSGA040642 Oryza indica BGIOSGA040642 N 0.844
Bo00285s440 Brassica oleracea Bo00285s440 I 0.857
Bo3g091780 Brassica oleracea Bo3g091780 I 0.864
Bo5g016510 Brassica oleracea Bo5g016510 I 0.857
Bo7g016210 Brassica oleracea Bo7g016210 I 0.864
Bo7g083870 Brassica oleracea Bo7g083870 I 0.857
Bo8g065080 Brassica oleracea Bo8g065080 I 0.857
Bo9g008020 Brassica oleracea Bo9g008020 I 0.857
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.857
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.857
Bostr.18351s0148 Boechera stricta Bostr.18351s0148 I 0.864
Bra002004 Brassica rapa Bra002004 I 0.864
Bra013041 Brassica rapa Bra013041 I 0.864
Bra016749 Brassica rapa Bra016749 I 0.857
Bra019794 Brassica rapa Bra019794 I 0.857
Bra025226 Brassica rapa Bra025226 I 0.857
Bra032947 Brassica rapa Bra032947 I 0.857
Bra034246 Brassica rapa Bra034246 I 0.857
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.857
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.851
BRADI5G05110 Brachypodium distachyon BRADI5G05110 N 0.844
Cagra.10862s0002 Capsella grandiflora Cagra.10862s0002 I 0.864
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.857
Carubv10016240m.g Capsella rubella Carubv10016240m.g I 0.864
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.857
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.857
cassava2997.m1 Manihot esculenta cassava2997.m1 I 0.847
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.857
Ca_01394 Cicer arietinum Ca_01394 I 0.857
Ca_05416 Cicer arietinum Ca_05416 I 0.864
Ca_23693 Cicer arietinum Ca_23693 I 0.864
Ca_23694 Cicer arietinum Ca_23694 I 0.864
Ca_23892 Cicer arietinum Ca_23892 I 0.846 Lotus japonicus I 0.857
Ciclev10009285m.g Citrus clementina Ciclev10009285m.g I 0.847
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.857
Cla002682 Citrullus lanatus Cla002682 I 0.857
Cla003283 Citrullus lanatus Cla003283 I 0.857
Cla016068 Citrullus lanatus Cla016068 I 0.901
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.901
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.857
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.857
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.878
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.901
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.857
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.857
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.898
Eucgr.C02208 Eucalyptus grandis Eucgr.C02208 I 0.847
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.894
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.857
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.881
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.894
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.857
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.901
F775_14780 Aegilops tauschii F775_14780 I 0.857
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.898
AMS Arabidopsis lyrata fgenesh2_kg.3__3272__AT2G16910.1 I 0.864
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.857
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.857
gene17273-v1.0-hybrid Fragaria vesca gene17273-v1.0-hybrid I 0.847
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.868
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.864
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.857
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.857
GLYMA09G06770 Glycine max GLYMA09G06770 I 0.847
GLYMA10G42830 Glycine max GLYMA10G42830 I 0.864
GLYMA15G18070 Glycine max GLYMA15G18070 I 0.847
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.857
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.848
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.857
GLYMA20G24170 Glycine max GLYMA20G24170 I 0.864
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.857
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.857
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.857
Gorai.008G036900 Gossypium raimondii Gorai.008G036900 I 0.890
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I 0.851
Gorai.013G242800 Gossypium raimondii Gorai.013G242800 I 0.847
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.857
GRMZM2G042893 Zea mays GRMZM2G042893 N 0.847
GRMZM2G042895 Zea mays GRMZM2G042895 N 0.844
GRMZM2G139372 Zea mays GRMZM2G139372 N 0.845
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.857
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.857
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.857
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.857
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.868
GSMUA_Achr11G09640_001 Musa acuminata GSMUA_Achr11G09640_001 I 0.846
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.881
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.881
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.857
GSMUA_Achr6G30900_001 Musa acuminata GSMUA_Achr6G30900_001 N 0.857
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.868
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.878
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.857
LjSGA_106153.1 Lotus japonicus LjSGA_106153.1 I 0.864
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.857
LPERR04G04520 Leersia perrieri LPERR04G04520 N 0.844
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.857
Lus10006951.g Linum usitatissimum Lus10006951.g I 0.847
Lus10030609.g Linum usitatissimum Lus10030609.g N 0.845
MDP0000133262 Malus domestica MDP0000133262 I 0.847
MDP0000243628 Malus domestica MDP0000243628 I 0.839
MDP0000247912 Malus domestica MDP0000247912 I 0.857
MDP0000304669 Malus domestica MDP0000304669 I 0.857
MDP0000318229 Malus domestica MDP0000318229 I 0.847
MDP0000405748 Malus domestica MDP0000405748 I 0.864
MDP0000662999 Malus domestica MDP0000662999 I 0.857
mgf012194m Mimulus guttatus mgf012194m I 0.857
mgf015974m Mimulus guttatus mgf015974m I 0.857
mgf016462m Mimulus guttatus mgf016462m I 0.857
mgf018455m Mimulus guttatus mgf018455m I 0.840
mgf019723m Mimulus guttatus mgf019723m I 0.868
mgf024029m Mimulus guttatus mgf024029m I 0.851
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.857
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.851
MLOC_62844 Hordeum vulgare MLOC_62844 N 0.844
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.857
MTR_1g112680 Medicago truncatula MTR_1g112680 I 0.864
MTR_2g038040 Medicago truncatula MTR_2g038040 I 0.847
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.857
MTR_7g083900 Medicago truncatula MTR_7g083900 I 0.846
OBART01G42600 Oryza barthii OBART01G42600 I 0.857
OBART02G01550 Oryza barthii OBART02G01550 I 0.848
OBART04G06800 Oryza barthii OBART04G06800 N 0.863
OBART11G15260 Oryza barthii OBART11G15260 I 0.857
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.857
OGLUM02G01420 Oryza glumaepatula OGLUM02G01420 I 0.848
OGLUM04G06590 Oryza glumaepatula OGLUM04G06590 N 0.863
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.857
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.857
OMERI02G00890 Oryza meridionalis OMERI02G00890 I 0.848
OMERI03G04020 Oryza meridionalis OMERI03G04020 N 0.844
OMERI03G04040 Oryza meridionalis OMERI03G04040 N 0.863
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.857
ONIVA01G07150 Oryza nivara ONIVA01G07150 N 0.839
ONIVA01G07170 Oryza nivara ONIVA01G07170 N 0.844
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.857
ONIVA02G01430 Oryza nivara ONIVA02G01430 I 0.848
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.857
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.857
OPUNC02G01010 Oryza punctata OPUNC02G01010 I 0.848
OPUNC04G05620 Oryza punctata OPUNC04G05620 N 0.863
OPUNC04G05630 Oryza punctata OPUNC04G05630 N 0.844
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.857
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.857
orange1.1g025665m.g Citrus sinensis orange1.1g025665m.g I 0.847
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.857
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.857
ORGLA02G0014200 Oryza glaberrima ORGLA02G0014200 I 0.848
ORGLA04G0051300 Oryza glaberrima ORGLA04G0051300 N 0.863
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.857
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.857
ORUFI02G01530 Oryza rufipogon ORUFI02G01530 I 0.848
ORUFI04G07840 Oryza rufipogon ORUFI04G07840 N 0.863
ORUFI04G07860 Oryza rufipogon ORUFI04G07860 N 0.844
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.857
OS01G0928000 Oryza sativa OS01G0928000 I 0.857
TDR Oryza sativa OS02G0120500 I 0.848
OS04G0300600 Oryza sativa OS04G0300600 N 0.863
OS04G0301500 Oryza sativa OS04G0301500 N 0.844
OS11G0523700 Oryza sativa OS11G0523700 I 0.857
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.851
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.857
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.857
Pavir.Ga02255 Panicum virgatum Pavir.Ga02255 N 0.843
Pavir.Ga02256 Panicum virgatum Pavir.Ga02256 N 0.844
Pavir.Gb02205 Panicum virgatum Pavir.Gb02205 N 0.844
Pavir.Ha01426 Panicum virgatum Pavir.Ha01426 I 0.846
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.857
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.881
PGSC0003DMG400004087 Solanum tuberosum PGSC0003DMG400004087 I 0.847
PGSC0003DMG400008195 Solanum tuberosum PGSC0003DMG400008195 I 0.890
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.881
PGSC0003DMG400017440 Solanum tuberosum PGSC0003DMG400017440 I 0.874
PK03241.1 Cannabis sativa PK03241.1 I 0.914
PK06841.1 Cannabis sativa PK06841.1 I 0.857
PK06940.1 Cannabis sativa PK06940.1 I 0.857
Pm008898 Prunus mume Pm008898 I 0.877
Pm016093 Prunus mume Pm016093 I 0.857
Pm020879 Prunus mume Pm020879 I 0.884
Pm024587 Prunus mume Pm024587 I 0.857
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.878
AMS Populus trichocarpa POPTR_0009s13860 I 0.864
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.857
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.857
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.891
POPTR_0018s13840 Populus trichocarpa POPTR_0018s13840 I 0.861
POPTR_0018s13850 Populus trichocarpa POPTR_0018s13850 I 0.867
POPTR_0018s13860 Populus trichocarpa POPTR_0018s13860 I 0.847
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.857
PRUPE_ppa010972mg Prunus persica PRUPE_ppa010972mg I 0.877
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.857
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.884
SapurV1A.0001s2820 Salix purpurea SapurV1A.0001s2820 I 0.861
SapurV1A.0140s0210 Salix purpurea SapurV1A.0140s0210 I 0.847
SapurV1A.0140s0240 Salix purpurea SapurV1A.0140s0240 I 0.867
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.891
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.864
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.857
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.857
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.857
SapurV1A.3355s0010 Salix purpurea SapurV1A.3355s0010 I 0.867
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.891
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.857
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.851
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.857
Sb07g004190 Sorghum bicolor Sb07g004190 N 0.844
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.857
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.857
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.901
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.901
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.901
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.901
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.857
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.857
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.857
Si001874m.g Setaria italica Si001874m.g I 0.857
Si006199m.g Setaria italica Si006199m.g I 0.854
Si006500m.g Setaria italica Si006500m.g I 0.848
Si010413m.g Setaria italica Si010413m.g N 0.844
Si010812m.g Setaria italica Si010812m.g N 0.844
Si019518m.g Setaria italica Si019518m.g I 0.871
Si026212m.g Setaria italica Si026212m.g I 0.857
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.857
Solyc05g014590.2 Solanum lycopersicum Solyc05g014590.2 I 0.874
Solyc07g018010.2 Solanum lycopersicum Solyc07g018010.2 I 0.847
Solyc08g062780.1 Solanum lycopersicum Solyc08g062780.1 I 0.890
TCM_014741 Theobroma cacao TCM_014741 I 0.857
TCM_017336 Theobroma cacao TCM_017336 I 0.857
TCM_039471 Theobroma cacao TCM_039471 I 0.847
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.857
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.857
Thhalv10022620m.g Eutrema salsugineum Thhalv10022620m.g I 0.864
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.857
Traes_2BL_8FED05903 Triticum aestivum Traes_2BL_8FED05903 N 0.844
Traes_2DL_DE3909A32 Triticum aestivum Traes_2DL_DE3909A32 N 0.844
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I 0.851
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.857
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.857
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.857
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.857
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.894
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.857
VIT_03s0038g02540 Vitis vinifera VIT_03s0038g02540 I 0.853
VIT_11s0052g00100 Vitis vinifera VIT_11s0052g00100 I 0.847
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.857
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.857