VIT_03s0038g02540 (Vitis vinifera)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 VIT_03s0038g02540 T046157_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AMS
M09782_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AMS_01
0.844 0.769
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_03s0038g02540.t01 bHLH 374 427

Links

Other bHLH family TFs
Other Vitis vinifera TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMS Arabidopsis thaliana AT2G16910 D 0.844
AMS Populus trichocarpa POPTR_0009s13860 I 0.844
AMS Arabidopsis lyrata fgenesh2_kg.3__3272__AT2G16910.1 I 0.844
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.861
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.858
Bo3g091780 Brassica oleracea Bo3g091780 I 0.844
Bo7g016210 Brassica oleracea Bo7g016210 I 0.844
Bostr.18351s0148 Boechera stricta Bostr.18351s0148 I 0.844
Bra002004 Brassica rapa Bra002004 I 0.844
Bra013041 Brassica rapa Bra013041 I 0.844
Cagra.10862s0002 Capsella grandiflora Cagra.10862s0002 I 0.844
Carubv10016240m.g Capsella rubella Carubv10016240m.g I 0.844
Ca_05416 Cicer arietinum Ca_05416 I 0.844
Ca_23693 Cicer arietinum Ca_23693 I 0.844
Ca_23694 Cicer arietinum Ca_23694 I 0.844
Cla016068 Citrullus lanatus Cla016068 I 0.841
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.841
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.858
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.841
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.874
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.861
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.874
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.841
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.844
GLYMA10G42830 Glycine max GLYMA10G42830 I 0.844
GLYMA20G24170 Glycine max GLYMA20G24170 I 0.844
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.861
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.861
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.858
LjSGA_106153.1 Lotus japonicus LjSGA_106153.1 I 0.844
MDP0000405748 Malus domestica MDP0000405748 I 0.844
MTR_1g112680 Medicago truncatula MTR_1g112680 I 0.844
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.861
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.861
PK03241.1 Cannabis sativa PK03241.1 I 0.853
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.858
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.871
POPTR_0018s13840 Populus trichocarpa POPTR_0018s13840 I 0.840
POPTR_0018s13850 Populus trichocarpa POPTR_0018s13850 I 0.846
SapurV1A.0001s2820 Salix purpurea SapurV1A.0001s2820 I 0.840
SapurV1A.0140s0240 Salix purpurea SapurV1A.0140s0240 I 0.846
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.871
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.844
SapurV1A.3355s0010 Salix purpurea SapurV1A.3355s0010 I 0.846
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.871
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.841
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.841
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.841
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.841
TCM_006602 Theobroma cacao TCM_006602 I 0.853
Thhalv10022620m.g Eutrema salsugineum Thhalv10022620m.g I 0.844
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.874