CIB1 (Vitis vinifera)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 VIT_03s0038g04760 T046158_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.888 0.941
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.888 0.902
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.888 0.902
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.888 0.902
AT2G18300
M01702_2.00
Arabidopsis thaliana
NBCACGTGCNNN

NNNGCACGTGVN
PBM
Weirauch et al.(2014)
pTH7289
0.878 0.843
BEE2
M01708_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8094
0.878 0.843
AT2G18300
M06729_2.00
Arabidopsis thaliana
ACTGGT

ACCAGT
Dap-seq
OMalley et al.(2016)
bHLH64_col_a
0.878 0.843
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.875 0.922
BHLH78
M01713_2.00
Arabidopsis thaliana
GCACGTGC

GCACGTGC
PBM
Weirauch et al.(2014)
pTH7666
0.875 0.922
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.875 0.922
BPE
M01700_2.00
Arabidopsis thaliana
NCACGTNNN

NNNACGTGN
PBM
Weirauch et al.(2014)
pTH7290
0.862 0.863
BPE
M06726_2.00
Arabidopsis thaliana
NNNNNNNNCACGTGNNNNNWB

VWNNNNNCACGTGNNNNNNNN
Dap-seq
OMalley et al.(2016)
bHLH31_col
0.862 0.863
PK05923.1
M01121_2.00
Cannabis sativa
NNNNNNN

NNNNNNN
PBM
Lambert et al.(2019)
pTH11368
0.855 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_03s0038g04760.t01 bHLH 260 310

Links

Other bHLH family TFs
Other Vitis vinifera TFs

857 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP14882 Atta cephalotes ACEP14882 N 0.000
TCNE_0001907801 Toxocara canis TCNE_0001907801 N 0.000
SVUK_0000622201 Strongylus vulgaris SVUK_0000622201 N 0.000
scaffold26-EXSNAP2012.56 Pristionchus exspectatus scaffold26-EXSNAP2012.56 N 0.000
NBR_0001426901 Nippostrongylus brasiliensis NBR_0001426901 N 0.000
HPLM_0001560201 Haemonchus placei HPLM_0001560201 N 0.000
HCOI00708300 Haemonchus contortus HCOI00708300 N 0.000
GPUH_0001020201 Gongylonema pulchrum GPUH_0001020201 N 0.000
ASU_04577 Ascaris suum ASU_04577 N 0.000
ANCDUO_01695 Ancylostoma duodenale ANCDUO_01695 N 0.000
ANCCEY_13862 Ancylostoma ceylanicum ANCCEY_13862 N 0.000
ANCCAN_04914 Ancylostoma caninum ANCCAN_04914 N 0.000
ADIR005407 Anopheles dirus ADIR005407 N 0.000
ISCW003309 Ixodes scapularis ISCW003309 N 0.000
ACYPI001458 Acyrthosiphon pisum ACYPI001458 N 0.000
TELCIR_06695 Teladorsagia circumcincta TELCIR_06695 N 0.000