Aan_R006542 (Calypte anna)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Aan_R006542 T046511_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYOD1
M04116_2.00
Homo sapiens
BAACASSTGNYV

BRNCASSTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1
0.884 0.962
MYOD1
M04117_2.00
Homo sapiens
BRVCASMTGDCG

CGHCAKSTGBYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2
0.884 0.962
MYOD1
M04120_2.00
Homo sapiens
NAACASSTGNYV

BRNCASSTGTTN
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1
0.884 0.962
MYOD1
M04121_2.00
Homo sapiens
BRMCASCTGDCR

YGHCAGSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2
0.884 0.962
Myod1
M08060_2.00
Mus musculus
NVNRRCAGSTGBN

NVCASCTGYYNBN
ChIP-seq
Mathelier et al.(2014)
MA0499.1
0.884 0.962
MYOD1
M08724_2.00
Homo sapiens
NVNNRNRRCAGCTGN

NCAGCTGYYNYNNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A
0.884 0.962
Myod1
M08745_2.00
Mus musculus
NVNRRNRRCAGSTGB

VCASCTGYYNYYNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A
0.884 0.962
MYOD1
M09838_2.00
Homo sapiens
HRVCACCTGHBB

VVDCAGGTGBYD
Transfac
Matys et al.(2006)
V$MYOD_01
0.884 0.962
MYOD1
M09839_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOD_Q6_02
0.884 0.962
MYOD1
M09840_2.00
Homo sapiens
NVCABCTGNY

RNCAGVTGBN
Transfac
Matys et al.(2006)
V$MYOD_Q6
0.884 0.962
MYOD1
M04118_2.00
Homo sapiens
BAACANVTGTYV

BRACABNTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1
0.884 0.962
MYOD1
M04119_2.00
Homo sapiens
BRRCASSTGDCR

YGHCASSTGYYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2
0.884 0.962
MYOD1
M04122_2.00
Homo sapiens
NAMCASSTGBYV

BRVCASSTGKTN
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1
0.884 0.962
MYOD1
M04123_2.00
Homo sapiens
BRMCASVTGNCR

YGNCABSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2
0.884 0.962
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY

RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.870 0.942
MYF5
M09821_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.870 0.942
MYOG
M04098_2.00
Homo sapiens
BRACAGCTGWCR

YGWCAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1
0.839 0.788
MYOG
M04099_2.00
Homo sapiens
NAACAGCTGTYN

NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2
0.839 0.788
MYOG
M04102_2.00
Homo sapiens
NRACARCTGWCR

YGWCAGYTGTYN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1
0.839 0.788
MYOG
M04103_2.00
Homo sapiens
NAACARYTGTYN

NRACARYTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2
0.839 0.788
Myog
M08061_2.00
Mus musculus
RRCAGCTGVNN

NNBCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0500.1
0.839 0.788
MYOG
M08721_2.00
Homo sapiens
BHVCAGCTGYYNB

VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B
0.839 0.788
Myog
M08755_2.00
Mus musculus
BHVCAGCTGYYNB

VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A
0.839 0.788
Myog
M09469_2.00
Mus musculus
RACAGCTG

CAGCTGTY
Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024
0.839 0.788
MYOG
M09829_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01
0.839 0.788
MYOG
M09830_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6
0.839 0.788
MYOG
M04100_2.00
Homo sapiens
BRACAGCTGTCR

YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1
0.839 0.788
MYOG
M04101_2.00
Homo sapiens
BAACAGCTGTYV

BRACAGCTGTTV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2
0.839 0.788
MYOG
M04104_2.00
Homo sapiens
BRACAGCTGTCR

YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1
0.839 0.788
MYOG
M04105_2.00
Homo sapiens
NAACAGCTGTYN

NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2
0.839 0.788
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R006542 bHLH 102 153

Links

Other bHLH family TFs
Other Calypte anna TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo9g052090 Brassica oleracea Bo9g052090 N 0.000
BRADI4G35670 Brachypodium distachyon BRADI4G35670 N 0.000
Cla007052 Citrullus lanatus Cla007052 N 0.000
evm.TU.supercontig_66.26 Carica papaya evm.TU.supercontig_66.26 N 0.000
evm.TU.supercontig_70.118 Carica papaya evm.TU.supercontig_70.118 N 0.000
GLYMA16G05840 Glycine max GLYMA16G05840 N 0.000
GSMUA_Achr6G17840_001 Musa acuminata GSMUA_Achr6G17840_001 N 0.000
ORUFI02G26600 Oryza rufipogon ORUFI02G26600 N 0.000
PGSC0003DMG400024928 Solanum tuberosum PGSC0003DMG400024928 N 0.000
Sb08g004610 Sorghum bicolor Sb08g004610 N 0.000
SELMODRAFT_429489 Selaginella moellendorffii SELMODRAFT_429489 N 0.000
SELMODRAFT_441321 Selaginella moellendorffii SELMODRAFT_441321 N 0.000
TCP8 Arabidopsis thaliana AT1G58100 D 0.000
Traes_5BL_B94C45A8F Triticum aestivum Traes_5BL_B94C45A8F N 0.000