Ca_19269 (Cicer arietinum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ca_19269 T046847_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BIM2
M01701_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8089
0.886 0.551
BIM2
M06727_2.00
Arabidopsis thaliana
CACGTGHBNNNNNNNNNNN

NNNNNNNNNNNVDCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_colamp
0.886 0.551
BIM2
M06728_2.00
Arabidopsis thaliana
CACGTGMBNNNCVYV

BRBGNNNVKCACGTG
Dap-seq
OMalley et al.(2016)
BIM2_col_v3b
0.886 0.551
SPT
M01709_2.00
Arabidopsis thaliana
NCACGTGSN

NSCACGTGN
PBM
Weirauch et al.(2014)
pTH8111
0.879 0.918
BIM1
M01710_2.00
Arabidopsis thaliana
NCRCGTGNNN

NNNCACGYGN
PBM
Weirauch et al.(2014)
pTH8114
0.866 0.531
BIM1
M06739_2.00
Arabidopsis thaliana
CACGTGAYNHNNNH

DNNNDNRTCACGTG
Dap-seq
OMalley et al.(2016)
BIM1_col_a
0.866 0.531
BIM1
M06740_2.00
Arabidopsis thaliana
NVKCACGTGMYHHNHNHNHNNN

NNNDNDNDNDDRKCACGTGMBN
Dap-seq
OMalley et al.(2016)
BIM1_colamp_a
0.866 0.531
BIM1
M09787_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BIM1_01
0.866 0.531
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM

KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.864 0.714
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.849 0.653
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG

CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.849 0.592
PIF3
M00854_2.00
Arabidopsis thaliana
CACGTGSNN

NNSCACGTG
PBM
Franco-Zorrilla et al.(2014)
PIF3
0.842 0.796
PIF3
M00722_2.00
Arabidopsis thaliana
NCACRTN

NAYGTGN
PBM
Chang et al.(2013)
pTH8200
0.842 0.796
PK05451.1
M01120_2.00
Cannabis sativa
YCACGTGM

KCACGTGR
PBM
Lambert et al.(2019)
pTH10100
0.842 0.796
PIF3
M08045_2.00
Arabidopsis thaliana
HCACGTGGVH

DBCCACGTGD
ChIP-seq
Mathelier et al.(2014)
MA0560.1
0.842 0.796
PIF3
M09780_2.00
Arabidopsis thaliana
BDRRRVCACGTGRVSHCD

HGDSBYCACGTGBYYYHV
Transfac
Matys et al.(2006)
P$PIF3_01
0.842 0.796
PIF3
M09781_2.00
Arabidopsis thaliana
DDDVCCACGTGGVMVNB

VNBKBCCACGTGGBHHH
Transfac
Matys et al.(2006)
P$PIF3_02
0.842 0.796
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_19269 bHLH 91 139

Links

Other bHLH family TFs
Other Cicer arietinum TFs

497 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
acj6 Drosophila melanogaster FBgn0000028 D 0.000
ACEP22036 Atta cephalotes ACEP22036 N 0.000
RPRC012293 Rhodnius prolixus RPRC012293 N 0.000
SINV13061 Solenopsis invicta SINV13061 N 0.000
TC003196 Tribolium castaneum TC003196 N 0.000
YQE_09839 Dendroctonus ponderosae YQE_09839 N 0.000
Hsal_10079--XP_394134.2_APIME Harpegnathos saltator Hsal_10079--XP_394134.2_APIME N 0.000
CLEC001203 Cimex lectularius CLEC001203 N 0.000
HHAL000313-PA Halyomorpha halys HHAL000313-PA N 0.000
LCUP002305 Lucilia cuprina LCUP002305 N 0.000
AARA006769 Anopheles arabiensis AARA006769 N 0.000
AEPI005265 Anopheles epiroticus AEPI005265 N 0.000
AFAF009952 Anopheles farauti AFAF009952 N 0.000
AFUN005073 Anopheles funestus AFUN005073 N 0.000
PHUM425120 Pediculus humanus PHUM425120 N 0.000
NV13017 Nasonia vitripennis NV13017 N 0.000
ACYPI002057 Acyrthosiphon pisum ACYPI002057 N 0.000
GF21043 Drosophila ananassae FBgn0098048 N 0.000
GG19406 Drosophila erecta FBgn0111609 N 0.000
GH17948 Drosophila grimshawi FBgn0125416 N 0.000
GM25017 Drosophila sechellia FBgn0179878 N 0.000
GD15807 Drosophila simulans FBgn0187465 N 0.000
GJ16375 Drosophila virilis FBgn0203559 N 0.000
GK20016 Drosophila willistoni FBgn0222013 N 0.000
GB45925 Apis mellifera GB45925 N 0.000
HMEL013520 Heliconius melpomene HMEL013520 N 0.000
KGM_18619 Danaus plexippus KGM_18619 N 0.000
MCINX006600 Melitaea cinxia MCINX006600 N 0.000
MDOA013496 Musca domestica MDOA013496 N 0.000