estExt_fgenesh1_pg.C_1630065 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh1_pg.C_1630065 T048325_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_1630065 bHLH 515 560

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

289 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30174.m008755 Ricinus communis 30174.m008755 I 0.000
30174.m008756 Ricinus communis 30174.m008756 I 0.000
30174.m008759 Ricinus communis 30174.m008759 I 0.000
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.000
ERF13 Arabidopsis thaliana AT2G44840 D 0.000
Bo4g024140 Brassica oleracea Bo4g024140 I 0.000
Bo4g195220 Brassica oleracea Bo4g195220 I 0.000
Bo9g001020 Brassica oleracea Bo9g001020 I 0.000
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.000
Bra004873 Brassica rapa Bra004873 I 0.000
Bra037630 Brassica rapa Bra037630 I 0.000
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.000
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.000
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.000
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.000
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.000
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.000
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.000
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.000
Ca_02325 Cicer arietinum Ca_02325 I 0.000
Ca_06034 Cicer arietinum Ca_06034 I 0.000
Ca_17211 Cicer arietinum Ca_17211 I 0.000
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.000
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.000
Ciclev10021132m.g Citrus clementina Ciclev10021132m.g I 0.000
Ciclev10022025m.g Citrus clementina Ciclev10022025m.g I 0.000
Ciclev10022734m.g Citrus clementina Ciclev10022734m.g I 0.000
Cla021383 Citrullus lanatus Cla021383 I 0.000
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.000
Eucgr.E01571 Eucalyptus grandis Eucgr.E01571 I 0.000
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.000
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.000
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.000
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.000
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.000
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.000
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.000
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.000
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.000
Eucgr.G00943 Eucalyptus grandis Eucgr.G00943 I 0.000
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.000
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.000
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I 0.000
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.000
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.000
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.000
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.000
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.000
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.000
Gorai.004G070500 Gossypium raimondii Gorai.004G070500 I 0.000
Gorai.004G070600 Gossypium raimondii Gorai.004G070600 I 0.000
Gorai.004G070700 Gossypium raimondii Gorai.004G070700 I 0.000
Gorai.004G070800 Gossypium raimondii Gorai.004G070800 I 0.000
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.000
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.000
Gorai.008G108400 Gossypium raimondii Gorai.008G108400 I 0.000
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.000
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.000
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.000
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.000
Lus10042907.g Linum usitatissimum Lus10042907.g I 0.000
MDP0000122665 Malus domestica MDP0000122665 I 0.000
MDP0000133485 Malus domestica MDP0000133485 I 0.000
MDP0000135205 Malus domestica MDP0000135205 I 0.000
MDP0000153445 Malus domestica MDP0000153445 I 0.000
MDP0000178398 Malus domestica MDP0000178398 I 0.000
MDP0000189033 Malus domestica MDP0000189033 I 0.000
MDP0000907929 Malus domestica MDP0000907929 I 0.000
mgf023779m Mimulus guttatus mgf023779m I 0.000
MLOC_51143 Hordeum vulgare MLOC_51143 I 0.000
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.000
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.000
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.000
MTR_8g006840 Medicago truncatula MTR_8g006840 I 0.000
orange1.1g032263m.g Citrus sinensis orange1.1g032263m.g I 0.000
orange1.1g039729m.g Citrus sinensis orange1.1g039729m.g I 0.000
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.000
orange1.1g047100m.g Citrus sinensis orange1.1g047100m.g I 0.000
Pm017696 Prunus mume Pm017696 I 0.000
Pm017698 Prunus mume Pm017698 I 0.000
Pm017699 Prunus mume Pm017699 I 0.000
Pm017700 Prunus mume Pm017700 I 0.000
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.000
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.000
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.000
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I 0.000
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.000
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.000
PRUPE_ppa023698mg Prunus persica PRUPE_ppa023698mg I 0.000
PRUPE_ppa025748mg Prunus persica PRUPE_ppa025748mg I 0.000
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.000
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.000
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.000
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.000
TCM_005705 Theobroma cacao TCM_005705 I 0.000
TCM_005706 Theobroma cacao TCM_005706 I 0.000
TCM_005707 Theobroma cacao TCM_005707 I 0.000
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.000
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.000
Traes_2AS_72E9B68D2 Triticum aestivum Traes_2AS_72E9B68D2 I 0.000
Traes_2BS_5E7287209 Triticum aestivum Traes_2BS_5E7287209 I 0.000
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I 0.000
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I 0.000
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I 0.000