CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.11654s0002
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.11654s0002
T049243_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.11654s0002.1.p
bHLH
87
136
RCRRHMLKERTRREKQKQCYLALHSLLPFATKNDKNSIVEKAVDEIGKLQ
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10027730m.g
Capsella rubella
Carubv10027730m.g
N
0.914
BHLH92
Arabidopsis thaliana
AT5G43650
N
0.911
BHLH92
Arabidopsis lyrata
fgenesh2_kg.390__1__AT5G43650.1
N
0.911
Bostr.3148s0106
Boechera stricta
Bostr.3148s0106
N
0.899
Thhalv10003353m.g
Eutrema salsugineum
Thhalv10003353m.g
N
0.887
Bra027501
Brassica rapa
Bra027501
N
0.863
evm.TU.supercontig_58.45
Carica papaya
evm.TU.supercontig_58.45
N
0.848
Bo7g065640
Brassica oleracea
Bo7g065640
N
0.844
Bra033690
Brassica rapa
Bra033690
N
0.844