CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.4456s0013
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.4456s0013
T049305_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.4456s0013.1.p
bHLH
361
398
RRKENEKFSVLRTMVPTVNEVDKESILNNTIKYLQELE
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10029523m.g
Eutrema salsugineum
Thhalv10029523m.g
N
0.914
Carubv10000576m.g
Capsella rubella
Carubv10000576m.g
N
0.914
Bostr.10064s0058
Boechera stricta
Bostr.10064s0058
N
0.914
ATMYC1
Arabidopsis thaliana
AT4G00480
N
0.914