CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.J00796
(
Eucalyptus grandis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Eucgr.J00796
T049693_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH
DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.902
0.918
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN
NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.902
0.918
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.879
0.939
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.J00796.1
bHLH
327
375
HPRSIAERVRRTKISERIRKLQDLVPNMDKQTNTADMLDLAVDYIKELQ
Eucgr.J00796.2
bHLH
327
357
HPRSIAERVRRTKISERIRKLQDLVPNMDKV
Eucgr.J00796.3
bHLH
278
307
ETEDLVPNMDKQTNTADMLDLAVDYIKELQ
Links
Other
bHLH
family TFs
Other
Eucalyptus grandis
TFs
164 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy