MDP0000229725 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000229725 T050385_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS01G0235700
M09894_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.914 0.979
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.890 0.875
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN

NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.890 0.875
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK

MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.890 0.875
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.890 0.854
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN

NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.890 0.854
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN

NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.882 0.646
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV

BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.879 0.854
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM

KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.843 0.479
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV

BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.840 0.604
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000229725 bHLH 436 483

Links

Other bHLH family TFs
Other Malus domestica TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgeneshPB_pg.37__87 Phycomyces blakesleeanus fgeneshPB_pg.37__87 N 0.000
PFL1_04963 Pseudozyma flocculosa PFL1_04963 N 0.000
PHSY_006649 Pseudozyma hubeiensis PHSY_006649 N 0.000
PSEUBRA_SCAF1g00570 Pseudozyma brasiliensis PSEUBRA_SCAF1g00570 N 0.000
RHTO_01675 Rhodosporidium toruloides RHTO_01675 N 0.000
RTG_03055 Rhodotorula glutinis RTG_03055 N 0.000
SPPG_03947 Spizellomyces punctatus SPPG_03947 N 0.000
sr12192 Sporisorium reilianum sr12192 N 0.000
UHOR_01348 Ustilago hordei UHOR_01348 N 0.000
UM00895 Ustilago maydis UM00895 N 0.000