CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g038558m.g
(
Citrus sinensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
orange1.1g038558m.g
T050607_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH
DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.866
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g038558m
bHLH
298
348
ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ
Links
Other
bHLH
family TFs
Other
Citrus sinensis
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy