CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ab01880
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.Ab01880
T050660_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ab01880.1.p
bHLH
116
165
AKAHIVTERERRKRMKDLFTNLHALMPHVSEKVDKATLVGETIHFIKALE
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Aa01766
Panicum virgatum
Pavir.Aa01766
N
0.914
Si017798m.g
Setaria italica
Si017798m.g
N
0.890
Pavir.Aa01765
Panicum virgatum
Pavir.Aa01765
N
0.887
Pavir.Aa01764
Panicum virgatum
Pavir.Aa01764
N
0.874
Pavir.Ab01881
Panicum virgatum
Pavir.Ab01881
N
0.867