Pavir.Ba03672 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ba03672 T050692_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.209.40.1
M01756_2.00
Physcomitrella patens
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8070
0.852 0.875
LRL2
M06738_2.00
Arabidopsis thaliana
CACGTGSVDMNCACG

CGTGNKHBSCACGTG
Dap-seq
OMalley et al.(2016)
bHLH69_col_a
0.852 0.833
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba03672.1.p bHLH 125 172

Links

Other bHLH family TFs
Other Panicum virgatum TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL014670 Aedes aegypti AAEL014670 I 0.000
ACHR008952 Anopheles christyi ACHR008952 I 0.000
AEPI008594 Anopheles epiroticus AEPI008594 I 0.000
AGAP000512 Anopheles gambiae AGAP000512 I 0.000
Alligator_sinensis_CCG020461.1 Alligator sinensis Alligator_sinensis_CCG020461.1 I 0.000
ALUE_0001723701 Ascaris lumbricoides ALUE_0001723701 I 0.000
ANCCEY_01108 Ancylostoma ceylanicum ANCCEY_01108 N 0.000
Aqu1.216869 Amphimedon queenslandica Aqu1.216869 I 0.000
AQUA008219 Anopheles quadriannulatus AQUA008219 I 0.000
BGIBMGA001129 Bombyx mori BGIBMGA001129 I 0.000
Bm11328 Brugia malayi Bm11328 I 0.000
BTMF_0001641801 Brugia timori BTMF_0001641801 N 0.000
CBG02541 Caenorhabditis briggsae CBG02541 I 0.000
CBN00477 Caenorhabditis brenneri CBN00477 I 0.000
CBN16859 Caenorhabditis brenneri CBN16859 I 0.000
CJA07640 Caenorhabditis japonica CJA07640 I 0.000
CPIJ013490 Culex quinquefasciatus CPIJ013490 I 0.000
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I 0.000
D915_00206 Fasciola hepatica D915_00206 I 0.000
D918_02241 Trichuris suis D918_02241 I 0.000
ECANG7_01760 Echinococcus canadensis ECANG7_01760 I 0.000
egl-44 Caenorhabditis elegans WBGene00001208 I 0.000
ENSCING00000019408 Ciona intestinalis ENSCING00000019408 I 0.000
ENSCSAVG00000007634 Ciona savignyi ENSCSAVG00000007634 I 0.000
ENSDORG00000004435 Dipodomys ordii ENSDORG00000004435 I 0.000
ENSEEUG00000001836 Erinaceus europaeus ENSEEUG00000001836 I 0.000
ENSFALG00000003635 Ficedula albicollis ENSFALG00000003635 I 0.000
ENSGALG00000000953 Gallus gallus ENSGALG00000000953 I 0.000
ENSGMOG00000010731 Gadus morhua ENSGMOG00000010731 I 0.000
ENSGMOG00000015271 Gadus morhua ENSGMOG00000015271 I 0.000
ENSLACG00000013349 Latimeria chalumnae ENSLACG00000013349 I 0.000
ENSLACG00000016444 Latimeria chalumnae ENSLACG00000016444 I 0.000
ENSLOCG00000009736 Lepisosteus oculatus ENSLOCG00000009736 I 0.000
ENSMPUG00000003624 Mustela putorius furo ENSMPUG00000003624 I 0.000
ENSNLEG00000008666 Nomascus leucogenys ENSNLEG00000008666 I 0.000
ENSONIG00000014698 Oreochromis niloticus ENSONIG00000014698 I 0.000
ENSP00000349828 Macaca fascicularis ENSP00000349828 I 0.000
ENSPANG00000018522 Papio anubis ENSPANG00000018522 I 0.000
ENSPFOG00000013997 Poecilia formosa ENSPFOG00000013997 I 0.000
ENSPSIG00000006176 Pelodiscus sinensis ENSPSIG00000006176 I 0.000
ENSSHAG00000015930 Sarcophilus harrisii ENSSHAG00000015930 I 0.000
ENSTSYG00000006048 Tarsius syrichta ENSTSYG00000006048 I 0.000
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I 0.000
GA21152 Drosophila pseudoobscura FBgn0081140 I 0.000
GPLIN_001580900 Globodera pallida GPLIN_001580900 N 0.000
HelroG146479 Helobdella robusta HelroG146479 I 0.000
NBR_0001654801 Nippostrongylus brasiliensis NBR_0001654801 I 0.000
NBR_0002152001 Nippostrongylus brasiliensis NBR_0002152001 I 0.000
nRc.2.0.1.g07693 Romanomermis culicivorax nRc.2.0.1.g07693 I 0.000
OFLC_0000413701 Onchocerca flexuosa OFLC_0000413701 I 0.000
PPAI001408 Phlebotomus papatasi PPAI001408 I 0.000
PTRK_0001645900 Parastrongyloides trichosuri PTRK_0001645900 N 0.000
Pvit_05988 Pogona vitticeps Pvit_05988 I 0.000
RSKR_0000765700 Rhabditophanes kr3021 RSKR_0000765700 N 0.000
sd Drosophila melanogaster FBgn0003345 D 0.000
SMAR011013 Strigamia maritima SMAR011013 I 0.000
SMAR013465 Strigamia maritima SMAR013465 I 0.000
SMTD_0001953201 Schistosoma mattheei SMTD_0001953201 I 0.000
SPAL_0001147900 Strongyloides papillosus SPAL_0001147900 N 0.000
SPAL_0001402900 Strongyloides papillosus SPAL_0001402900 N 0.000
SROB_0002407501 Schistosoma rodhaini SROB_0002407501 I 0.000
Tead1 Mus musculus ENSMUSG00000055320 D 0.000
tead1 Xenopus tropicalis XB-GENE-5909149 I 0.000
TEAD1 Microcebus murinus ENSMICG00000007178 I 0.000
tead1a Takifugu rubripes ENSTRUG00000005940 I 0.000
tead1a Danio rerio ENSDARG00000028159 I 0.000
tead1b Danio rerio ENSDARG00000059483 I 0.000
Tead2 Mus musculus ENSMUSG00000030796 D 0.000
TEAD2 Sus scrofa ENSSSCG00000025568 I 0.000
TEAD2 Erinaceus europaeus ENSEEUG00000012244 I 0.000
TEAD3 Canis familiaris ENSCAFG00000001326 I 0.000
TEAD3 Procavia capensis ENSPCAG00000010213 I 0.000
TEAD3 Equus caballus ENSECAG00000015056 I 0.000
TEAD3 Otolemur garnettii ENSOGAG00000002943 I 0.000
Tead3 Dipodomys ordii ENSDORG00000010798 I 0.000
TEAD3 Taeniopygia guttata ENSTGUG00000001691 I 0.000
TEAD3 Sorex araneus ENSSARG00000008305 I 0.000
TEAD3 Pteropus vampyrus ENSPVAG00000002764 I 0.000
TEAD3 Microcebus murinus ENSMICG00000000029 I 0.000
TEAD3 Tursiops truncatus ENSTTRG00000009434 I 0.000
TEAD3 Pan troglodytes ENSPTRG00000018086 I 0.000
TEAD3 Macaca mulatta ENSMMUG00000015909 I 0.000
TEAD3 Loxodonta africana ENSLAFG00000014818 I 0.000
TEAD3 Gorilla gorilla ENSGGOG00000001847 I 0.000
tead3a Takifugu rubripes ENSTRUG00000011546 I 0.000
tead3a Gasterosteus aculeatus ENSGACG00000009758 I 0.000
tead3b Takifugu rubripes ENSTRUG00000018177 I 0.000
TEAD4 Dasypus novemcinctus ENSDNOG00000030589 I 0.000
TEAD4 Oryzias latipes ENSORLG00000002553 I 0.000
TEAD4 Macaca mulatta ENSMMUG00000011299 I 0.000
TEAD4 Ornithorhynchus anatinus ENSOANG00000001389 I 0.000
TEAD4 Takifugu rubripes ENSTRUG00000016489 I 0.000
TEAD4 Procavia capensis ENSPCAG00000013738 I 0.000
Tead4 Mus musculus ENSMUSG00000030353 D 0.000
TEAD4 Meleagris gallopavo ENSMGAG00000013910 I 0.000
TEAD4 Homo sapiens ENSG00000197905 D 0.000
TsM_000210300 Taenia solium TsM_000210300 I 0.000
XP_002943057 Xenopus tropicalis XP_002943057 I 0.000