Thhalv10000808m.g (Eutrema salsugineum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Thhalv10000808m.g T051172_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN

NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.914 1.000
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.914 0.979
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN

NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.914 0.979
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK

MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.914 0.979
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.914 0.958
OS01G0235700
M09894_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.890 0.875
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV

BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.879 0.896
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN

NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.858 0.583
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV

BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.840 0.646
BHLH14
M09785_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT4G00870_01
0.840 0.771
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10000808m bHLH 489 536

Links

Other bHLH family TFs
Other Eutrema salsugineum TFs

561 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
mg014488m Mimulus guttatus mg014488m N 0.000
mgf026017m Mimulus guttatus mgf026017m N 0.000
mgf025809m Mimulus guttatus mgf025809m N 0.000
mgf025763m Mimulus guttatus mgf025763m N 0.000
mgf024870m Mimulus guttatus mgf024870m N 0.000
mgf024422m Mimulus guttatus mgf024422m N 0.000
mgf024048m Mimulus guttatus mgf024048m N 0.000
mgf023940m Mimulus guttatus mgf023940m N 0.000
mgf023378m Mimulus guttatus mgf023378m N 0.000
mgf023322m Mimulus guttatus mgf023322m N 0.000
mgf022254m Mimulus guttatus mgf022254m N 0.000
mgf021201m Mimulus guttatus mgf021201m N 0.000
mgf021139m Mimulus guttatus mgf021139m N 0.000
mgf020029m Mimulus guttatus mgf020029m N 0.000
mgf019416m Mimulus guttatus mgf019416m N 0.000
mgf018575m Mimulus guttatus mgf018575m N 0.000
mgf018147m Mimulus guttatus mgf018147m N 0.000
mgf017634m Mimulus guttatus mgf017634m N 0.000
mgf026445m Mimulus guttatus mgf026445m N 0.000