CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LCUP012116
(
Lucilia cuprina
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
LCUP012116
T051474_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
amos
M03603_2.00
Drosophila melanogaster
RVCATATGBY
RVCATATGBY
SELEX
Nitta et al.(2015)
amos_1
0.886
0.981
amos
M03604_2.00
Drosophila melanogaster
RRCAKMTGYY
RRCAKMTGYY
SELEX
Nitta et al.(2015)
amos_2
0.886
0.981
amos
M05952_2.00
Drosophila melanogaster
RMCAYMTGBYV
BRVCAKRTGKY
B1H
Zhu et al.(2011)
amos_da_SANGER_10_FBgn0003270
0.886
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LCUP012116-PA
bHLH
168
220
RRLAANARERRRMNSLNDAFDKLRDVVPSLGNDRRLSKYETLQMAQAYIGDLV
Links
Other
bHLH
family TFs
Other
Lucilia cuprina
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
amos
Drosophila melanogaster
FBgn0003270
D
0.886
GK24655
Drosophila willistoni
FBgn0226615
I
0.886
GE12726
Drosophila yakuba
FBgn0230450
I
0.886
MDOA000520
Musca domestica
MDOA000520
I
0.886
GM17083
Drosophila sechellia
FBgn0171995
I
0.886
GD21828
Drosophila simulans
FBgn0193248
I
0.886
GA10296
Drosophila pseudoobscura
FBgn0070354
I
0.886
GL18743
Drosophila persimilis
FBgn0156344
I
0.886
GG21703
Drosophila erecta
FBgn0113881
I
0.886
PHUM221110
Pediculus humanus
PHUM221110
I
0.878
GI17198
Drosophila mojavensis
FBgn0139942
I
0.862
GJ19805
Drosophila virilis
FBgn0206947
I
0.862
GH10530
Drosophila grimshawi
FBgn0118011
I
0.862
SMAR006456
Strigamia maritima
SMAR006456
N
0.860
SMAR002729
Strigamia maritima
SMAR002729
N
0.857
MESCA002401
Megaselia scalaris
MESCA002401
N
0.842