estExt_fgeneshCV_pg.C_120023 (Chlorella vulgaris)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgeneshCV_pg.C_120023 T052090_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PIF5
M08047_2.00 		Arabidopsis thaliana
YCACRTGS
SCAYGTGR		 ChIP-seq
Mathelier et al.(2014)
MA0562.1 		0.851 0.469
PIF5
M09452_2.00 		Arabidopsis thaliana
NNBCAYGTGV
BCACRTGVNN		 Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062 		0.851 0.469
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgeneshCV_pg.C_120023 bHLH 112 160

Links

Other bHLH family TFs
Other Chlorella vulgaris TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh1_pg.C_100270 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_100270 I 0.914
CHLREDRAFT_183777 Chlamydomonas reinhardtii CHLREDRAFT_183777 N 0.864
OB07G12160 Oryza brachyantha OB07G12160 I 0.852
IGS.gm_8_00085 Chlorella NC64A IGS.gm_8_00085 N 0.852
Bo4g108070 Brassica oleracea Bo4g108070 I 0.851
PIF5 Arabidopsis thaliana AT3G59060 D 0.851
ORGLA07G0023700 Oryza glaberrima ORGLA07G0023700 I 0.849
OS07G0143200 Oryza sativa OS07G0143200 I 0.849
ONIVA07G01070 Oryza nivara ONIVA07G01070 I 0.849
ORUFI07G02530 Oryza rufipogon ORUFI07G02530 I 0.849
OBART07G02670 Oryza barthii OBART07G02670 I 0.849
OMERI07G01290 Oryza meridionalis OMERI07G01290 I 0.849
BGIOSGA025137 Oryza indica BGIOSGA025137 I 0.849
BRADI1G06670 Brachypodium distachyon BRADI1G06670 I 0.848
F775_31861 Aegilops tauschii F775_31861 I 0.848
GRMZM5G865967 Zea mays GRMZM5G865967 I 0.848
TRIUR3_14996 Triticum urartu TRIUR3_14996 I 0.848