L892_g28061 (Steinernema scapterisci)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 L892_g28061 T054311_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Srebf1
M00754_2.00
Mus musculus
VWCAYVYSAB

VTSRBRTGWB
PBM
Weirauch et al.(2013)
pTH0914
0.846 0.647
Srebf1
M01724_2.00
Mus musculus
RWCAYVYBD

HVRBRTGWY
PBM
Weirauch et al.(2014)
pTH5161
0.846 0.647
Srebf1
M02816_2.00
Mus musculus
RTCACGTGAY

RTCACGTGAY
SELEX
Jolma et al.(2013)
Srebf1_1
0.846 0.647
SREBF1
M04062_2.00
Homo sapiens
VHCACVCSAY

RTSGBGTGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1
0.846 0.647
SREBF1
M04063_2.00
Homo sapiens
VHCRCGYGDB

VHCRCGYGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2
0.846 0.647
SREBF1
M08048_2.00
Homo sapiens
VTCACSCCAY

RTGGSGTGAB
ChIP-seq
Mathelier et al.(2014)
MA0595.1
0.846 0.647
SREBF1
M08711_2.00
Homo sapiens
VTCACVYSAYH

DRTSRBGTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A
0.846 0.647
Srebf1
M08749_2.00
Mus musculus
VTCASSYSABN

NVTSRSSTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B
0.846 0.647
SREBF1
M09796_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBF1_02
0.846 0.647
SREBF1
M09797_2.00
Homo sapiens
NATCACGTGAB

VTCACGTGATN
Transfac
Matys et al.(2006)
V$SREBP1_01
0.846 0.647
SREBF1
M09798_2.00
Homo sapiens
KRTCACCCCAC

GTGGGGTGAYM
Transfac
Matys et al.(2006)
V$SREBP1_02
0.846 0.647
SREBF1
M09799_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q5
0.846 0.647
SREBF1
M09800_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6_01
0.846 0.647
SREBF1
M09801_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6
0.846 0.647
SREBF1
M04064_2.00
Homo sapiens
MTCACVCCAY

RTGGBGTGAK
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1
0.846 0.647
SREBF1
M04065_2.00
Homo sapiens
RTCACCTGAY

RTCAGGTGAY
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2
0.846 0.647
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L892_g28061.t1 bHLH 387 437

Links

Other bHLH family TFs
Other Steinernema scapterisci TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009070 Calypte anna Aan_R009070 I 0.846
Alligator_sinensis_CCG012315.1 Alligator sinensis Alligator_sinensis_CCG012315.1 I 0.870
ANCCAN_02634 Ancylostoma caninum ANCCAN_02634 I 0.840
ANCCEY_06558 Ancylostoma ceylanicum ANCCEY_06558 I 0.840
BGIBMGA001211 Bombyx mori BGIBMGA001211 I 0.851
Cmyd_10008393 Chelonia mydas Cmyd_10008393 I 0.860
D918_03166 Trichuris suis D918_03166 N 0.844
DICVIV_05621 Dictyocaulus viviparus DICVIV_05621 I 0.840
ENSAMEG00000005129 Ailuropoda melanoleuca ENSAMEG00000005129 I 0.846
ENSAMXG00000009016 Astyanax mexicanus ENSAMXG00000009016 I 0.846
ENSCSAG00000008412 Chlorocebus sabaeus ENSCSAG00000008412 I 0.846
ENSFALG00000013762 Ficedula albicollis ENSFALG00000013762 I 0.846
ENSLACG00000013149 Latimeria chalumnae ENSLACG00000013149 I 0.846
ENSLOCG00000008766 Lepisosteus oculatus ENSLOCG00000008766 I 0.846
ENSMEUG00000001306 Macropus eugenii ENSMEUG00000001306 I 0.846
ENSMPUG00000000024 Mustela putorius furo ENSMPUG00000000024 I 0.846
ENSNLEG00000013625 Nomascus leucogenys ENSNLEG00000013625 I 0.846
ENSOARG00000001504 Ovis aries ENSOARG00000001504 I 0.846
ENSONIG00000002304 Oreochromis niloticus ENSONIG00000002304 I 0.846
ENSP00000348069 Macaca fascicularis ENSP00000348069 I 0.846
ENSPANG00000023675 Papio anubis ENSPANG00000023675 I 0.846
ENSPFOG00000010306 Poecilia formosa ENSPFOG00000010306 I 0.846
ENSPMAG00000001400 Petromyzon marinus ENSPMAG00000001400 I 0.846
ENSPPYG00000008037 Pongo abelii ENSPPYG00000008037 I 0.846
ENSPSIG00000005996 Pelodiscus sinensis ENSPSIG00000005996 I 0.873
ENSSHAG00000018607 Sarcophilus harrisii ENSSHAG00000018607 I 0.846
ENSSSCG00000023124 Sus scrofa ENSSSCG00000023124 I 0.846
ENSSTOG00000014939 Ictidomys tridecemlineatus ENSSTOG00000014939 I 0.846
ENSXMAG00000014774 Xiphophorus maculatus ENSXMAG00000014774 I 0.846
Gfo_R006283 Geospiza fortis Gfo_R006283 I 0.846
HCOI01299300 Haemonchus contortus HCOI01299300 I 0.840
HCOI02041100 Haemonchus contortus HCOI02041100 I 0.840
HelroG66987 Helobdella robusta HelroG66987 I 0.840
L596_g18997 Steinernema carpocapsae L596_g18997 I 0.914
L889_g16826 Steinernema feltiae L889_g16826 I 0.914
L893_g8503 Steinernema glaseri L893_g8503 I 0.914
L898_g465 Steinernema monticolum L898_g465 I 0.914
Myotis_brandtii_SREBF1_10023215 Myotis brandtii Myotis_brandtii_SREBF1_10023215 I 0.846
NBR_0002173001 Nippostrongylus brasiliensis NBR_0002173001 I 0.840
NECAME_14255 Necator americanus NECAME_14255 I 0.840
Ogr11708 Ophisaurus gracilis Ogr11708 I 0.846
Pvit_05020 Pogona vitticeps Pvit_05020 I 0.846
srebf1 Xenopus tropicalis XB-GENE-987572 I 0.846
SREBF1 Gallus gallus ENSGALG00000027188 I 0.846
srebf1 Gasterosteus aculeatus ENSGACG00000012064 I 0.846
SREBF1 Homo sapiens ENSG00000072310 D 0.846
SREBF1 Felis catus ENSFCAG00000001983 I 0.846
SREBF1 Echinops telfairi ENSETEG00000004179 I 0.846
SREBF1 Ornithorhynchus anatinus ENSOANG00000012278 I 0.846
SREBF1 Equus caballus ENSECAG00000019802 I 0.846
srebf1 Danio rerio ENSDARG00000067607 I 0.846
SREBF1 Cavia porcellus ENSCPOG00000002439 I 0.846
SREBF1 Callithrix jacchus ENSCJAG00000008953 I 0.846
SREBF1 Canis familiaris ENSCAFG00000018436 I 0.846
SREBF1 Bos taurus ENSBTAG00000007884 I 0.846
SREBF1 Pteropus vampyrus ENSPVAG00000005765 I 0.846
SREBF1 Gorilla gorilla ENSGGOG00000002713 I 0.846
Srebf1 Dipodomys ordii ENSDORG00000012333 I 0.846
Srebf1 Rattus norvegicus ENSRNOG00000003463 I 0.846
SREBF1 Procavia capensis ENSPCAG00000014903 I 0.846
srebf1 Oryzias latipes ENSORLG00000009437 I 0.846
SREBF1 Taeniopygia guttata ENSTGUG00000007313 I 0.846
srebf1 Tetraodon nigroviridis ENSTNIG00000011957 I 0.846
SREBF1 Ochotona princeps ENSOPRG00000015069 I 0.846
SREBF1 Otolemur garnettii ENSOGAG00000002910 I 0.846
Srebf1 Mus musculus ENSMUSG00000020538 D 0.846
SREBF1 Monodelphis domestica ENSMODG00000014074 I 0.846
SREBF1 Macaca mulatta ENSMMUG00000023375 I 0.846
SREBF1 Microcebus murinus ENSMICG00000012535 I 0.846
SREBF1 Loxodonta africana ENSLAFG00000021644 I 0.846
TELCIR_06021 Teladorsagia circumcincta TELCIR_06021 I 0.840
TELCIR_07862 Teladorsagia circumcincta TELCIR_07862 I 0.840
tetur08g03870 Tetranychus urticae tetur08g03870 I 0.846
TTRE_0000754701 Trichuris trichiura TTRE_0000754701 N 0.844
XP_002944649 Xenopus tropicalis XP_002944649 I 0.846