BGIBMGA007697 (Bombyx mori)
Brinker

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09607 (BrkDBD) IPR018586 BGIBMGA007697 T055518_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
brk
M03628_2.00
Drosophila melanogaster
WRGCGCCGGCGCYW

WRGCGCCGGCGCYW
SELEX
Nitta et al.(2015)
brk_1
0.732 0.732
brk
M03629_2.00
Drosophila melanogaster
WRGCGCCAGGCGCYW

WRGCGCCTGGCGCYW
SELEX
Nitta et al.(2015)
brk_2
0.732 0.732
brk
M03630_2.00
Drosophila melanogaster
WRGCGCCATGGCGCYW

WRGCGCCATGGCGCYW
SELEX
Nitta et al.(2015)
brk_3
0.732 0.732
brk
M06013_2.00
Drosophila melanogaster
RGCGCCRS

SYGGCGCY
B1H
Zhu et al.(2011)
brk_FlyReg_FBgn0024250
0.732 0.732
brk
M07539_2.00
Drosophila melanogaster
RGCGCCRS

SYGGCGCY
DNaseI footprinting
Mathelier et al.(2014)
MA0213.1
0.732 0.732
brk
M09658_2.00
Drosophila melanogaster
BHRRCGCCABBHVV

BBDVVTGGCGYYDV
Misc
Kulakovskiy et al.(2009)
brk
0.732 0.732
brk
M09903_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$BRK_Q6
0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA007697-TA Brinker 68 123

Links

Other Brinker family TFs
Other Bombyx mori TFs

Invalid Input OrderBy

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action