GH24261 (Drosophila grimshawi)
Brinker

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09607 (BrkDBD) IPR018586 FBgn0131717 T055667_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
brk
M03628_2.00 		Drosophila melanogaster
WRGCGCCGGCGCYW
WRGCGCCGGCGCYW		 SELEX
Nitta et al.(2015)
brk_1 		0.966 0.966
brk
M03629_2.00 		Drosophila melanogaster
WRGCGCCAGGCGCYW
WRGCGCCTGGCGCYW		 SELEX
Nitta et al.(2015)
brk_2 		0.966 0.966
brk
M03630_2.00 		Drosophila melanogaster
WRGCGCCATGGCGCYW
WRGCGCCATGGCGCYW		 SELEX
Nitta et al.(2015)
brk_3 		0.966 0.966
brk
M06013_2.00 		Drosophila melanogaster
RGCGCCRS
SYGGCGCY		 B1H
Zhu et al.(2011)
brk_FlyReg_FBgn0024250 		0.966 0.966
brk
M07539_2.00 		Drosophila melanogaster
RGCGCCRS
SYGGCGCY		 DNaseI footprinting
Mathelier et al.(2014)
MA0213.1 		0.966 0.966
brk
M09658_2.00 		Drosophila melanogaster
BHRRCGCCABBHVV
BBDVVTGGCGYYDV		 Misc
Kulakovskiy et al.(2009)
brk 		0.966 0.966
brk
M09903_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$BRK_Q6 		0.966 0.966
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0158167 Brinker 2 59

Links

Other Brinker family TFs
Other Drosophila grimshawi TFs

Invalid Input OrderBy

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action