AT1G19490 (Arabidopsis thaliana)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 AT1G19490 T056861_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT1G19490
M09904_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT1G19490_01
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G19490.1 bZIP 156 225

Links

Other bZIP family TFs
Other Arabidopsis thaliana TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I 0.898
Bostr.7128s0552 Boechera stricta Bostr.7128s0552 I 0.889
Cagra.1961s0053 Capsella grandiflora Cagra.1961s0053 I 0.889
Carubv10011417m.g Capsella rubella Carubv10011417m.g I 0.889
Bo5g027510 Brassica oleracea Bo5g027510 I 0.881
Bra025743 Brassica rapa Bra025743 I 0.881
TCM_022516 Theobroma cacao TCM_022516 I 0.873
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I 0.860
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I 0.860
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I 0.859
GLYMA19G37801 Glycine max GLYMA19G37801 I 0.856
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I 0.856
Cucsa.240980 Cucumis sativus Cucsa.240980 I 0.856
Cla017983 Citrullus lanatus Cla017983 I 0.856
orange1.1g011345m.g Citrus sinensis orange1.1g011345m.g I 0.855
Lus10003255.g Linum usitatissimum Lus10003255.g I 0.855
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I 0.855
gene30252-v1.0-hybrid Fragaria vesca gene30252-v1.0-hybrid I 0.854
GLYMA03G35101 Glycine max GLYMA03G35101 I 0.852
28779.m000140 Ricinus communis 28779.m000140 I 0.851
evm.TU.supercontig_5.51 Carica papaya evm.TU.supercontig_5.51 I 0.835
Lus10035597.g Linum usitatissimum Lus10035597.g I 0.819
PK09783.1 Cannabis sativa PK09783.1 I 0.819
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I 0.817
MTR_7g104190 Medicago truncatula MTR_7g104190 I 0.805
cassava31755.valid.m1 Manihot esculenta cassava31755.valid.m1 I 0.799
Aquca_027_00443 Aquilegia coerulea Aquca_027_00443 I 0.798
MDP0000147745 Malus domestica MDP0000147745 I 0.794
Ca_00780 Cicer arietinum Ca_00780 I 0.792
MDP0000203904 Malus domestica MDP0000203904 I 0.790
Solyc09g009760.1 Solanum lycopersicum Solyc09g009760.1 I 0.788