CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo3g004060
(
Brassica oleracea
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bo3g004060
T057264_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TGA10
M06783_2.00
Arabidopsis thaliana
NVTGACGTCAKCDNH
DNHGMTGACGTCABN
Dap-seq
OMalley et al.(2016)
TGA10_col_a
0.806
0.979
TGA10
M06784_2.00
Arabidopsis thaliana
DRTGACGTCAKCDN
NHGMTGACGTCAYH
Dap-seq
OMalley et al.(2016)
TGA10_colamp_a
0.806
0.979
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo3g004060.1
bZIP
152
201
SDPKTLRRLAQNREAARKSRLRKKAYVQQLESCRIKLSQLEQEIQRARSQ
Links
Other
bZIP
family TFs
Other
Brassica oleracea
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy