Bra003500 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra003500 T057402_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV

BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.888 0.889
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV

BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.888 0.889
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003500.1-P bZIP 18 80

Links

Other bZIP family TFs
Other Brassica rapa TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP10172 Atta cephalotes ACEP10172 N 0.000
ACEP10174 Atta cephalotes ACEP10174 N 0.000
BGIBMGA008080 Bombyx mori BGIBMGA008080 N 0.000
CapteG21565 Capitella teleta CapteG21565 N 0.000
CapteG225552 Capitella teleta CapteG225552 N 0.000
CGI_10004589 Crassostrea gigas CGI_10004589 N 0.000
DAPPUDRAFT_98257 Daphnia pulex DAPPUDRAFT_98257 N 0.000
HMEL012144 Heliconius melpomene HMEL012144 N 0.000
Hsal_05452--XP_393412.3_APIME Harpegnathos saltator Hsal_05452--XP_393412.3_APIME N 0.000
Hsal_05455--XP_391818.2_APIME Harpegnathos saltator Hsal_05455--XP_391818.2_APIME N 0.000
ISCW005133 Ixodes scapularis ISCW005133 N 0.000
KGM_04335 Danaus plexippus KGM_04335 N 0.000
L798_00773 Zootermopsis nevadensis L798_00773 N 0.000
LDEC002874 Leptinotarsa decemlineata LDEC002874 N 0.000
LLOJ000590 Lutzomyia longipalpis LLOJ000590 N 0.000
LotgiG156395 Lottia gigantea LotgiG156395 N 0.000
LotgiG211956 Lottia gigantea LotgiG211956 N 0.000
LotgiG230146 Lottia gigantea LotgiG230146 N 0.000
MCINX013661 Melitaea cinxia MCINX013661 N 0.000
NV12561 Nasonia vitripennis NV12561 N 0.000
Ocbimv22007340m.g Octopus bimaculoides Ocbimv22007340m.g N 0.000
SINV18430 Solenopsis invicta SINV18430 N 0.000
SMAR007951 Strigamia maritima SMAR007951 N 0.000
TC000693 Tribolium castaneum TC000693 N 0.000