Bra007276 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra007276 T057417_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DPBF3
M01133_2.00
Arabidopsis thaliana
HBACGTGKMN

NKMCACGTVD
PBM
Lambert et al.(2019)
pTH11531
0.811 0.981
DPBF3
M01058_2.00
Arabidopsis thaliana
HBACGTGKM

KMCACGTVD
PBM
Sullivan et al.(2014)
pTH7219
0.811 0.981
DPBF3
M01059_2.00
Arabidopsis thaliana
NNMCACGTVN

NBACGTGKNN
PBM
Sullivan et al.(2014)
pTH7547
0.811 0.981
DPBF3
M06777_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_colamp_a
0.811 0.981
DPBF3
M06778_2.00
Arabidopsis thaliana
TGMCACGTSWYMHHH

DDDKRWSACGTGKCA
Dap-seq
OMalley et al.(2016)
AREB3_col_v31
0.811 0.981
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra007276.1-P bZIP 207 260

Links

Other bZIP family TFs
Other Brassica rapa TFs

215 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_32479 Aegilops tauschii F775_32479 I 0.793
F775_31964 Aegilops tauschii F775_31964 I 0.808
F775_43558 Aegilops tauschii F775_43558 I 0.789
F775_17024 Aegilops tauschii F775_17024 I 0.801
F775_28711 Aegilops tauschii F775_28711 I 0.799
AMTR_s00101p00038080 Amborella trichopoda AMTR_s00101p00038080 I 0.808
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.785
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I 0.788
Aquca_009_00009 Aquilegia coerulea Aquca_009_00009 I 0.799
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.794
FD Arabidopsis lyrata Al_scaffold_0007_453 I 0.784
EEL Arabidopsis lyrata fgenesh2_kg.4__2235__AT2G41070.2 I 0.797
AREB3 Arabidopsis lyrata scaffold_502836.1 I 0.811
FD Arabidopsis thaliana AT4G35900 I 0.784
DPBF3 Arabidopsis thaliana AT3G56850 D 0.811
ATBZIP27 Arabidopsis thaliana AT2G17770 I 0.786
EEL Arabidopsis thaliana AT2G41070 I 0.797
Bostr.9345s0024 Boechera stricta Bostr.9345s0024 I 0.797
Bostr.20505s0068 Boechera stricta Bostr.20505s0068 I 0.811
Bostr.12302s0127 Boechera stricta Bostr.12302s0127 I 0.783
BRADI2G21820 Brachypodium distachyon BRADI2G21820 I 0.822
BRADI2G53060 Brachypodium distachyon BRADI2G53060 I 0.801
BRADI4G43850 Brachypodium distachyon BRADI4G43850 I 0.809
Bo4g012940 Brassica oleracea Bo4g012940 I 0.797
Bo8g091160 Brassica oleracea Bo8g091160 I 0.822
Bo6g072380 Brassica oleracea Bo6g072380 I 0.822
Bo4g112690 Brassica oleracea Bo4g112690 I 0.822
Bra014668 Brassica rapa Bra014668 I 0.822
Bra016953 Brassica rapa Bra016953 I 0.807
Bra003253 Brassica rapa Bra003253 I 0.822
Bra007274 Brassica rapa Bra007274 I 0.822
Cagra.1642s0072 Capsella grandiflora Cagra.1642s0072 I 0.799
Cagra.0578s0014 Capsella grandiflora Cagra.0578s0014 I 0.811
Carubv10023893m.g Capsella rubella Carubv10023893m.g I 0.799
Carubv10018770m.g Capsella rubella Carubv10018770m.g I 0.808
evm.TU.supercontig_33.182 Carica papaya evm.TU.supercontig_33.182 I 0.822
Ca_15706 Cicer arietinum Ca_15706 I 0.797
Ca_08143 Cicer arietinum Ca_08143 I 0.808
Ca_23748 Cicer arietinum Ca_23748 I 0.810
Cla000389 Citrullus lanatus Cla000389 I 0.796
Cla013878 Citrullus lanatus Cla013878 I 0.808
Ciclev10012205m.g Citrus clementina Ciclev10012205m.g I 0.808
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I 0.796
Ciclev10001893m.g Citrus clementina Ciclev10001893m.g I 0.808
orange1.1g021146m.g Citrus sinensis orange1.1g021146m.g I 0.809
orange1.1g020697m.g Citrus sinensis orange1.1g020697m.g I 0.808
Cucsa.184670 Cucumis sativus Cucsa.184670 I 0.799
Cucsa.385090 Cucumis sativus Cucsa.385090 I 0.782
Cucsa.364380 Cucumis sativus Cucsa.364380 I 0.809
Eucgr.G00615 Eucalyptus grandis Eucgr.G00615 I 0.799
Eucgr.J00320 Eucalyptus grandis Eucgr.J00320 I 0.811
Eucgr.K01706 Eucalyptus grandis Eucgr.K01706 I 0.811
Thhalv10017050m.g Eutrema salsugineum Thhalv10017050m.g I 0.797
Thhalv10006121m.g Eutrema salsugineum Thhalv10006121m.g I 0.811
gene00393-v1.0-hybrid Fragaria vesca gene00393-v1.0-hybrid I 0.809
GLYMA03G00580 Glycine max GLYMA03G00580 I 0.811
GLYMA04G14840 Glycine max GLYMA04G14840 I 0.798
GLYMA05G25200 Glycine max GLYMA05G25200 I 0.797
GLYMA06G47220 Glycine max GLYMA06G47220 I 0.799
GLYMA08G24340 Glycine max GLYMA08G24340 I 0.809
GLYMA15G35080 Glycine max GLYMA15G35080 I 0.811
GLYMA19G30230 Glycine max GLYMA19G30230 I 0.811
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I 0.799
Gorai.009G301200 Gossypium raimondii Gorai.009G301200 I 0.809
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I 0.796
Gorai.009G301400 Gossypium raimondii Gorai.009G301400 I 0.809
MLOC_6534 Hordeum vulgare MLOC_6534 I 0.809
MLOC_4554 Hordeum vulgare MLOC_4554 I 0.801
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.793
MLOC_16096 Hordeum vulgare MLOC_16096 I 0.799
MLOC_61490 Hordeum vulgare MLOC_61490 I 0.793
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.795
LPERR05G16840 Leersia perrieri LPERR05G16840 I 0.809
LPERR01G30010 Leersia perrieri LPERR01G30010 I 0.807
Lus10008927.g Linum usitatissimum Lus10008927.g I 0.809
Lus10028889.g Linum usitatissimum Lus10028889.g I 0.809
LjSGA_023611.1 Lotus japonicus LjSGA_023611.1 I 0.796
chr4.CM0337.330.nc Lotus japonicus chr4.CM0337.330.nc I 0.797
MDP0000215106 Malus domestica MDP0000215106 I 0.807
MDP0000740787 Malus domestica MDP0000740787 I 0.786
MDP0000198495 Malus domestica MDP0000198495 I 0.796
MDP0000273211 Malus domestica MDP0000273211 I 0.811
MDP0000706379 Malus domestica MDP0000706379 I 0.797
cassava22423.valid.m1 Manihot esculenta cassava22423.valid.m1 I 0.809
MTR_8g043960 Medicago truncatula MTR_8g043960 I 0.786
MTR_7g088090 Medicago truncatula MTR_7g088090 I 0.811
MTR_3g010660 Medicago truncatula MTR_3g010660 I 0.808
mgf011003m Mimulus guttatus mgf011003m I 0.809
mgf009464m Mimulus guttatus mgf009464m N 0.785
mgf002556m Mimulus guttatus mgf002556m I 0.808
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.786
GSMUA_Achr11G15610_001 Musa acuminata GSMUA_Achr11G15610_001 I 0.800
GSMUA_Achr2G20490_001 Musa acuminata GSMUA_Achr2G20490_001 I 0.787
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.795
GSMUA_AchrUn_randomG12190_001 Musa acuminata GSMUA_AchrUn_randomG12190_001 I 0.802
GSMUA_Achr8G21560_001 Musa acuminata GSMUA_Achr8G21560_001 I 0.808
OBART07G26790 Oryza barthii OBART07G26790 I 0.808
OBART01G34790 Oryza barthii OBART01G34790 I 0.803
OBART01G37980 Oryza barthii OBART01G37980 I 0.797
OBART05G21000 Oryza barthii OBART05G21000 I 0.809
OB01G46760 Oryza brachyantha OB01G46760 I 0.795
OB05G28440 Oryza brachyantha OB05G28440 I 0.809
OB07G32300 Oryza brachyantha OB07G32300 I 0.808
OB01G43630 Oryza brachyantha OB01G43630 I 0.804
ORGLA01G0286100 Oryza glaberrima ORGLA01G0286100 I 0.804
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.795
ORGLA03G0149400 Oryza glaberrima ORGLA03G0149400 I 0.808
OGLUM03G15730 Oryza glumaepatula OGLUM03G15730 I 0.808
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.797
OGLUM01G38810 Oryza glumaepatula OGLUM01G38810 I 0.803
OGLUM05G22240 Oryza glumaepatula OGLUM05G22240 I 0.809
OGLUM07G26780 Oryza glumaepatula OGLUM07G26780 I 0.808
BGIOSGA026419 Oryza indica BGIOSGA026419 I 0.808
BGIOSGA020087 Oryza indica BGIOSGA020087 I 0.809
BGIOSGA000613 Oryza indica BGIOSGA000613 I 0.801
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.795
BGIOSGA010835 Oryza indica BGIOSGA010835 I 0.808
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.795
OLONG_003399 Oryza longistaminata OLONG_003399 I 0.809
OLONG_002030 Oryza longistaminata OLONG_002030 I 0.803
OMERI07G23410 Oryza meridionalis OMERI07G23410 I 0.808
OMERI03G14020 Oryza meridionalis OMERI03G14020 I 0.808
OMERI01G32080 Oryza meridionalis OMERI01G32080 I 0.803
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.795
OMERI05G18990 Oryza meridionalis OMERI05G18990 I 0.809
ONIVA01G39770 Oryza nivara ONIVA01G39770 I 0.803
ONIVA03G16560 Oryza nivara ONIVA03G16560 I 0.808
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.797
ONIVA05G21710 Oryza nivara ONIVA05G21710 I 0.809
ONIVA07G26520 Oryza nivara ONIVA07G26520 I 0.808
OPUNC05G18710 Oryza punctata OPUNC05G18710 I 0.796
OPUNC01G33790 Oryza punctata OPUNC01G33790 I 0.808
OPUNC07G25180 Oryza punctata OPUNC07G25180 I 0.808
ORUFI01G38120 Oryza rufipogon ORUFI01G38120 I 0.803
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.797
ORUFI05G22290 Oryza rufipogon ORUFI05G22290 I 0.809
ORUFI07G27740 Oryza rufipogon ORUFI07G27740 I 0.808
OS01G0813100 Oryza sativa OS01G0813100 I 0.801
OS07G0686100 Oryza sativa OS07G0686100 I 0.808
OS01G0859300 Oryza sativa OS01G0859300 I 0.795
OS03G0322700 Oryza sativa OS03G0322700 I 0.808
OS05G0489700 Oryza sativa OS05G0489700 I 0.809
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.795
Pavir.Ba00263 Panicum virgatum Pavir.Ba00263 I 0.808
Pavir.Bb03699 Panicum virgatum Pavir.Bb03699 I 0.808
Pavir.Eb03523 Panicum virgatum Pavir.Eb03523 I 0.803
Pavir.Ib01001 Panicum virgatum Pavir.Ib01001 I 0.794
Pavir.J34085 Panicum virgatum Pavir.J34085 I 0.807
Pavir.J38875 Panicum virgatum Pavir.J38875 I 0.803
Pavir.J05672 Panicum virgatum Pavir.J05672 I 0.807
POPTR_0006s02670 Populus trichocarpa POPTR_0006s02670 I 0.783
POPTR_0008s01130 Populus trichocarpa POPTR_0008s01130 I 0.808
POPTR_0016s02460 Populus trichocarpa POPTR_0016s02460 I 0.784
POPTR_0010s25440 Populus trichocarpa POPTR_0010s25440 I 0.808
POPTR_0010s25460 Populus trichocarpa POPTR_0010s25460 I 0.808
Pm016826 Prunus mume Pm016826 I 0.808
Pm004043 Prunus mume Pm004043 I 0.799
PRUPE_ppa025544mg Prunus persica PRUPE_ppa025544mg I 0.799
PRUPE_ppa008716mg Prunus persica PRUPE_ppa008716mg I 0.809
30226.m002055 Ricinus communis 30226.m002055 I 0.808
29955.m001177 Ricinus communis 29955.m001177 I 0.795
SapurV1A.0070s0720 Salix purpurea SapurV1A.0070s0720 I 0.811
SapurV1A.0036s0930 Salix purpurea SapurV1A.0036s0930 I 0.811
SapurV1A.0036s0950 Salix purpurea SapurV1A.0036s0950 I 0.809
SapurV1A.0362s0080 Salix purpurea SapurV1A.0362s0080 I 0.784
SapurV1A.2287s0010 Salix purpurea SapurV1A.2287s0010 I 0.784
SELMODRAFT_227594 Selaginella moellendorffii SELMODRAFT_227594 I 0.791
SELMODRAFT_266892 Selaginella moellendorffii SELMODRAFT_266892 I 0.785
SELMODRAFT_443424 Selaginella moellendorffii SELMODRAFT_443424 I 0.785
SELMODRAFT_91900 Selaginella moellendorffii SELMODRAFT_91900 I 0.794
SELMODRAFT_94516 Selaginella moellendorffii SELMODRAFT_94516 I 0.794
SELMODRAFT_451399 Selaginella moellendorffii SELMODRAFT_451399 I 0.791
Si002173m.g Setaria italica Si002173m.g I 0.803
Si022639m.g Setaria italica Si022639m.g I 0.808
Si001731m.g Setaria italica Si001731m.g I 0.797
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I 0.799
Solyc10g081350.1 Solanum lycopersicum Solyc10g081350.1 I 0.811
PGSC0003DMG400028121 Solanum tuberosum PGSC0003DMG400028121 I 0.811
PGSC0003DMG400007208 Solanum tuberosum PGSC0003DMG400007208 I 0.799
PGSC0003DMG400029774 Solanum tuberosum PGSC0003DMG400029774 I 0.799
Sb01g036810 Sorghum bicolor Sb01g036810 I 0.794
Sb09g023920 Sorghum bicolor Sb09g023920 I 0.809
Sb03g040510 Sorghum bicolor Sb03g040510 I 0.797
Sb03g037740 Sorghum bicolor Sb03g037740 I 0.791
Sb02g043620 Sorghum bicolor Sb02g043620 I 0.809
TCM_006432 Theobroma cacao TCM_006432 I 0.796
TCM_044596 Theobroma cacao TCM_044596 I 0.811
Traes_3AL_58F294736 Triticum aestivum Traes_3AL_58F294736 I 0.808
Traes_4DL_F38ED7FB6 Triticum aestivum Traes_4DL_F38ED7FB6 I 0.793
Traes_4BL_4C9A415F3 Triticum aestivum Traes_4BL_4C9A415F3 I 0.793
Traes_4AS_F9C171219 Triticum aestivum Traes_4AS_F9C171219 I 0.793
TRAES3BF001900070CFD_g Triticum aestivum TRAES3BF001900070CFD_g I 0.802
Traes_3DL_20ED2EA4C Triticum aestivum Traes_3DL_20ED2EA4C I 0.811
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.793
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.793
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.793
Traes_5DL_73CE92096 Triticum aestivum Traes_5DL_73CE92096 I 0.801
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.793
Traes_1DL_D9BA83221 Triticum aestivum Traes_1DL_D9BA83221 I 0.808
Traes_5BL_FB4EDEA83 Triticum aestivum Traes_5BL_FB4EDEA83 I 0.801
Traes_1AL_1FFBFB058 Triticum aestivum Traes_1AL_1FFBFB058 I 0.809
Traes_1BL_DE2CF9613 Triticum aestivum Traes_1BL_DE2CF9613 I 0.809
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.793
TRIUR3_06726 Triticum urartu TRIUR3_06726 I 0.808
TRIUR3_29638 Triticum urartu TRIUR3_29638 I 0.795
TRIUR3_12792 Triticum urartu TRIUR3_12792 I 0.808
TRIUR3_15490 Triticum urartu TRIUR3_15490 I 0.793
TRIUR3_24203 Triticum urartu TRIUR3_24203 I 0.800
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I 0.788
VIT_13s0175g00120 Vitis vinifera VIT_13s0175g00120 I 0.809
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.782
GRMZM2G077124 Zea mays GRMZM2G077124 I 0.809
GRMZM2G159134 Zea mays GRMZM2G159134 I 0.797
GRMZM2G161009 Zea mays GRMZM2G161009 I 0.809
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.795