Bra016959 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra016959 T057452_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BZIP17
M01778_2.00
Arabidopsis thaliana
NNHBACGYRN

NYRCGTVDNN
PBM
Weirauch et al.(2014)
pTH7221
0.883 0.891
TGA1B_TOBAC
M10083_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1B_01
0.826 0.688
TGA1B_TOBAC
M10084_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TGA1B_Q2
0.826 0.688
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra016959.1-P bZIP 182 245

Links

Other bZIP family TFs
Other Brassica rapa TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29940.m000398 Ricinus communis 29940.m000398 I 0.872
AMTR_s00101p00121930 Amborella trichopoda AMTR_s00101p00121930 I 0.874
Aquca_009_00077 Aquilegia coerulea Aquca_009_00077 I 0.889
BGIOSGA018059 Oryza indica BGIOSGA018059 I 0.825
Bo4g012880 Brassica oleracea Bo4g012880 I 0.857
Bo4g190610 Brassica oleracea Bo4g190610 I 0.853
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I 0.883
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I 0.799
BZIP17 Arabidopsis lyrata scaffold_402899.1 I 0.883
BZIP17 Arabidopsis thaliana AT2G40950 D 0.883
BZIP39 Oryza sativa OS05G0411300 I 0.825
BZIP49 Arabidopsis thaliana AT3G56660 I 0.840
BZIP49 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001722 I 0.833
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I 0.883
Carubv10022722m.g Capsella rubella Carubv10022722m.g I 0.883
cassava24522.valid.m1 Manihot esculenta cassava24522.valid.m1 I 0.860
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I 0.849
Ca_08103 Cicer arietinum Ca_08103 I 0.871
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I 0.872
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I 0.864
Cla017717 Citrullus lanatus Cla017717 I 0.856
Cucsa.337510 Cucumis sativus Cucsa.337510 I 0.856
Eucgr.A02199 Eucalyptus grandis Eucgr.A02199 I 0.874
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I 0.878
e_gw1.25.198.1 Physcomitrella patens e_gw1.25.198.1 I 0.788
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I 0.847
GLYMA03G27865 Glycine max GLYMA03G27865 I 0.823
GLYMA19G30681 Glycine max GLYMA19G30681 I 0.824
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I 0.857
GRMZM2G045236 Zea mays GRMZM2G045236 I 0.825
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I 0.783
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I 0.826
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I 0.800
LPERR05G13000 Leersia perrieri LPERR05G13000 I 0.825
Lus10010440.g Linum usitatissimum Lus10010440.g I 0.883
Lus10012104.g Linum usitatissimum Lus10012104.g I 0.883
Lus10027290.g Linum usitatissimum Lus10027290.g I 0.857
Lus10038995.g Linum usitatissimum Lus10038995.g I 0.857
MDP0000138811 Malus domestica MDP0000138811 I 0.831
MDP0000180785 Malus domestica MDP0000180785 I 0.849
MDP0000270677 Malus domestica MDP0000270677 I 0.849
MDP0000299504 Malus domestica MDP0000299504 I 0.831
mgf002378m Mimulus guttatus mgf002378m I 0.855
mgf013640m Mimulus guttatus mgf013640m I 0.838
MTR_7g088890 Medicago truncatula MTR_7g088890 I 0.871
OB05G24300 Oryza brachyantha OB05G24300 I 0.801
OGLUM05G17320 Oryza glumaepatula OGLUM05G17320 I 0.825
ONIVA05G17010 Oryza nivara ONIVA05G17010 I 0.825
OPUNC05G14460 Oryza punctata OPUNC05G14460 I 0.825
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I 0.864
ORGLA05G0141100 Oryza glaberrima ORGLA05G0141100 I 0.825
ORUFI05G17550 Oryza rufipogon ORUFI05G17550 I 0.825
Pavir.J00385 Panicum virgatum Pavir.J00385 I 0.825
Pavir.J18543 Panicum virgatum Pavir.J18543 I 0.807
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I 0.843
PK07115.1 Cannabis sativa PK07115.1 I 0.857
Pm016493 Prunus mume Pm016493 I 0.864
POPTR_0006s03300 Populus trichocarpa POPTR_0006s03300 I 0.844
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I 0.852
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I 0.864
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I 0.863
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I 0.863
Sb09g020320 Sorghum bicolor Sb09g020320 I 0.813
Si021442m.g Setaria italica Si021442m.g I 0.825
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I 0.843
TCM_023889 Theobroma cacao TCM_023889 I 0.877
TGA1B_TOBAC Nicotiana tabacum TGA1B_TOBAC D 0.826
Thhalv10005827m.g Eutrema salsugineum Thhalv10005827m.g I 0.811
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I 0.883
VIT_08s0040g00870 Vitis vinifera VIT_08s0040g00870 I 0.874