CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra019436
(
Brassica rapa
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
Bra019436
T057463_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK24205.1
M01161_2.00
Cannabis sativa
NCACGTGKCN
NGMCACGTGN
PBM
Lambert et al.(2019)
pTH10152
0.792
0.559
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra019436.1-P
bZIP
262
320
MERRQRRMIKNRESAARSRARRQAYTVELELELNQLTEENMKLKKIVVMNRSTQITKEK
Links
Other
bZIP
family TFs
Other
Brassica rapa
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy