ATF6B (Callithrix jacchus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSCJAG00000036009 T059252_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATF6B
M04375_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1
0.883 1.000
ATF6B
M04376_2.00
Homo sapiens
NRTGACGTGGCR

YGCCACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2
0.883 1.000
ATF6B
M04377_2.00
Homo sapiens
TGCCACGTGGCR

YGCCACGTGGCA
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3
0.883 1.000
ATF6B
M04041_2.00
Homo sapiens
GRTGACGTGGCR

YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1
0.883 1.000
ATF6B
M04042_2.00
Homo sapiens
YGMCACGTGKCR

YGMCACGTGKCR
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2
0.883 1.000
ATF6B
M04043_2.00
Homo sapiens
RTGACGTCAYC

GRTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3
0.883 1.000
ATF6B
M04044_2.00
Homo sapiens
MCCACGATGT

ACATCGTGGK
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4
0.883 1.000
ATF6B
M04378_2.00
Homo sapiens
SRTGACGTCAYB

VRTGACGTCAYS
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1
0.883 1.000
ATF6B
M04379_2.00
Homo sapiens
BRTGACGTGGCR

YGCCACGTCAYV
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2
0.883 1.000
ATF6
M04254_2.00
Homo sapiens
YKRTGACGTGGCAN

NTGCCACGTCAYMR
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1
0.832 0.625
ATF6
M04255_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2
0.832 0.625
ATF6
M04018_2.00
Homo sapiens
GRTGACGTGGCR

YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1
0.832 0.625
ATF6
M04019_2.00
Homo sapiens
KAGTCACGTGK

MCACGTGACTM
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2
0.832 0.625
ATF6
M04020_2.00
Homo sapiens
BNRTGACGTCATCA

TGATGACGTCAYNV
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3
0.832 0.625
ATF6
M04021_2.00
Homo sapiens
ACCACGATGTY

RACATCGTGGT
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4
0.832 0.625
ATF6
M08790_2.00
Homo sapiens
VBSSTGACGTGG

CCACGTCASSVB
Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B
0.832 0.625
ATF6
M09947_2.00
Homo sapiens
TGACGTGG

CCACGTCA
Transfac
Matys et al.(2006)
V$ATF6_01
0.832 0.625
ATF6
M04256_2.00
Homo sapiens
YGRTGACGTGGCRN

NYGCCACGTCAYCR
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1
0.832 0.625
ATF6
M04257_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2
0.832 0.625
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000052186 bZIP 320 386

Links

Other bZIP family TFs
Other Callithrix jacchus TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_43210 Aegilops tauschii F775_43210 I 0.000
F775_04223 Aegilops tauschii F775_04223 I 0.000
BRADI3G18670 Brachypodium distachyon BRADI3G18670 N 0.000
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.000
LPERR06G13350 Leersia perrieri LPERR06G13350 N 0.000
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.000
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.000
OBART06G13310 Oryza barthii OBART06G13310 N 0.000
OBART09G00850 Oryza barthii OBART09G00850 N 0.000
OBART01G45740 Oryza barthii OBART01G45740 N 0.000
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.000
ORGLA06G0273400 Oryza glaberrima ORGLA06G0273400 N 0.000
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.000
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.000
OGLUM06G14250 Oryza glumaepatula OGLUM06G14250 N 0.000
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.000
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.000
BGIOSGA022830 Oryza indica BGIOSGA022830 N 0.000
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.000
OLONG_015132 Oryza longistaminata OLONG_015132 N 0.000
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.000
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.000
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.000
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.000
ONIVA06G15960 Oryza nivara ONIVA06G15960 N 0.000
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.000
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.000
OPUNC06G12720 Oryza punctata OPUNC06G12720 N 0.000
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.000
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.000
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.000
ORUFI06G14240 Oryza rufipogon ORUFI06G14240 N 0.000
OS01G0975800 Oryza sativa OS01G0975800 N 0.000
OS09G0116800 Oryza sativa OS09G0116800 N 0.000
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.000
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.000
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.000
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.000
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.000
PDK_20s1363011g003 Phoenix dactylifera PDK_20s1363011g003 N 0.000
Si019951m.g Setaria italica Si019951m.g I 0.000
Sb06g015640 Sorghum bicolor Sb06g015640 N 0.000
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.000
Sb0836s002010 Sorghum bicolor Sb0836s002010 N 0.000
Sb07g007373 Sorghum bicolor Sb07g007373 N 0.000
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.000
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.000
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.000
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.000
GRMZM2G459864 Zea mays GRMZM2G459864 N 0.000