ATF6 (Meleagris gallopavo)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSMGAG00000005185 T060173_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATF6
M04254_2.00
Homo sapiens
YKRTGACGTGGCAN

NTGCCACGTCAYMR
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1
0.866 0.889
ATF6
M04255_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2
0.866 0.889
ATF6
M04018_2.00
Homo sapiens
GRTGACGTGGCR

YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1
0.866 0.889
ATF6
M04019_2.00
Homo sapiens
KAGTCACGTGK

MCACGTGACTM
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2
0.866 0.889
ATF6
M04020_2.00
Homo sapiens
BNRTGACGTCATCA

TGATGACGTCAYNV
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3
0.866 0.889
ATF6
M04021_2.00
Homo sapiens
ACCACGATGTY

RACATCGTGGT
SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4
0.866 0.889
ATF6
M08790_2.00
Homo sapiens
VBSSTGACGTGG

CCACGTCASSVB
Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B
0.866 0.889
ATF6
M09947_2.00
Homo sapiens
TGACGTGG

CCACGTCA
Transfac
Matys et al.(2006)
V$ATF6_01
0.866 0.889
ATF6
M04256_2.00
Homo sapiens
YGRTGACGTGGCRN

NYGCCACGTCAYCR
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1
0.866 0.889
ATF6
M04257_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2
0.866 0.889
ATF6B
M04375_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1
0.817 0.603
ATF6B
M04376_2.00
Homo sapiens
NRTGACGTGGCR

YGCCACGTCAYN
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2
0.817 0.603
ATF6B
M04377_2.00
Homo sapiens
TGCCACGTGGCR

YGCCACGTGGCA
SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3
0.817 0.603
ATF6B
M04041_2.00
Homo sapiens
GRTGACGTGGCR

YGCCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1
0.817 0.603
ATF6B
M04042_2.00
Homo sapiens
YGMCACGTGKCR

YGMCACGTGKCR
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2
0.817 0.603
ATF6B
M04043_2.00
Homo sapiens
RTGACGTCAYC

GRTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3
0.817 0.603
ATF6B
M04044_2.00
Homo sapiens
MCCACGATGT

ACATCGTGGK
SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4
0.817 0.603
ATF6B
M04378_2.00
Homo sapiens
SRTGACGTCAYB

VRTGACGTCAYS
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1
0.817 0.603
ATF6B
M04379_2.00
Homo sapiens
BRTGACGTGGCR

YGCCACGTCAYV
SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2
0.817 0.603
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMGAP00000005101 bZIP 249 314

Links

Other bZIP family TFs
Other Meleagris gallopavo TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BRADI2G48057 Brachypodium distachyon BRADI2G48057 N 0.000
MLOC_15725 Hordeum vulgare MLOC_15725 N 0.000
LPERR01G24570 Leersia perrieri LPERR01G24570 N 0.000
GSMUA_Achr3G32440_001 Musa acuminata GSMUA_Achr3G32440_001 N 0.000
OBART01G28660 Oryza barthii OBART01G28660 N 0.000
OB01G37620 Oryza brachyantha OB01G37620 N 0.000
ORGLA01G0237800 Oryza glaberrima ORGLA01G0237800 N 0.000
OGLUM01G32660 Oryza glumaepatula OGLUM01G32660 N 0.000
OLONG_005218 Oryza longistaminata OLONG_005218 N 0.000
OMERI01G26210 Oryza meridionalis OMERI01G26210 N 0.000
ONIVA01G32780 Oryza nivara ONIVA01G32780 N 0.000
OPUNC01G28450 Oryza punctata OPUNC01G28450 N 0.000
ORUFI01G31760 Oryza rufipogon ORUFI01G31760 N 0.000
OS01G0713600 Oryza sativa OS01G0713600 N 0.000
Pavir.Ea02612 Panicum virgatum Pavir.Ea02612 N 0.000
Pavir.Eb02614 Panicum virgatum Pavir.Eb02614 N 0.000
Si004459m.g Setaria italica Si004459m.g N 0.000
Sb03g032730 Sorghum bicolor Sb03g032730 N 0.000
TRAES3BF111700070CFD_g Triticum aestivum TRAES3BF111700070CFD_g N 0.000
Traes_3DL_2C29058E6 Triticum aestivum Traes_3DL_2C29058E6 N 0.000
GRMZM2G035701 Zea mays GRMZM2G035701 N 0.000