Alligator_sinensis_CCG018001.1 (Alligator sinensis)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Alligator_sinensis_CCG018001.1 T069871_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Dbp
M00762_2.00 		Mus musculus
NVTTRYVHVW
WBDBRYAABN		 PBM
Weirauch et al.(2013)
pTH3831 		0.868 0.859
Dbp
M01820_2.00 		Mus musculus
NNWWACRTAANNN
NNNTTAYGTWWNN		 PBM
Weirauch et al.(2014)
pTH4377 		0.868 0.859
DBP
M02827_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Jolma et al.(2013)
DBP_1 		0.868 0.859
DBP
M02828_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
DBP_2 		0.868 0.859
Dbp
M02868_2.00 		Mus musculus
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Jolma et al.(2013)
Dbp_1 		0.868 0.859
DBP
M04235_2.00 		Homo sapiens
NVTTACRTAABN
NVTTAYGTAABN		 SELEX
Yin et al.(2017)
DBP_eDBD_HT-SELEX 		0.868 0.859
DBP
M04237_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
DBP_FL_HT-SELEX 		0.868 0.859
DBP
M04013_2.00 		Homo sapiens
RTKACGTAAY
RTTACGTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
DBP.1 		0.868 0.859
DBP
M08785_2.00 		Homo sapiens
VTTRTGYAABN
NVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
DBP_HUMAN.H11MO.0.B 		0.868 0.859
Dbp
M08844_2.00 		Mus musculus
VTTRTGYAABN
NVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
DBP_MOUSE.H11MO.0.B 		0.868 0.859
DBP
M09934_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DBP_Q6_01 		0.868 0.859
DBP
M09935_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DBP_Q6_02 		0.868 0.859
DBP
M09936_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DBP_Q6 		0.868 0.859
DBP
M04236_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Yin et al.(2017)
DBP_eDBD_Methyl-HT-SELEX 		0.868 0.859
DBP
M04238_2.00 		Homo sapiens
NRTTACRTAAYV
BRTTAYGTAAYN		 SELEX
Yin et al.(2017)
DBP_FL_Methyl-HT-SELEX 		0.868 0.859
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.788 0.703
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.788 0.703
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.788 0.703
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.788 0.703
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.788 0.703
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.788 0.703
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.788 0.703
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.788 0.703
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG018001.1 bZIP 207 270

Links

Other bZIP family TFs
Other Alligator sinensis TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ogr12886 Ophisaurus gracilis Ogr12886 I 0.909
DBP Anolis carolinensis ENSACAG00000015667 I 0.909
Pvit_12136 Pogona vitticeps Pvit_12136 I 0.909
dbp Xenopus tropicalis XB-GENE-5995286 I 0.909
ENSLACG00000006062 Latimeria chalumnae ENSLACG00000006062 I 0.897
ENSPFOG00000010189 Poecilia formosa ENSPFOG00000010189 I 0.891
ENSXMAG00000012054 Xiphophorus maculatus ENSXMAG00000012054 I 0.891
ENSPSIG00000015238 Pelodiscus sinensis ENSPSIG00000015238 I 0.881
ENSSSCG00000024294 Sus scrofa ENSSSCG00000024294 I 0.868
ENSMEUG00000000663 Macropus eugenii ENSMEUG00000000663 I 0.868
ENSSTOG00000024246 Ictidomys tridecemlineatus ENSSTOG00000024246 I 0.868
DBP Sus scrofa ENSSSCG00000003148 I 0.868
DBP Loxodonta africana ENSLAFG00000013079 I 0.868
DBP Procavia capensis ENSPCAG00000011426 I 0.868
DBP Homo sapiens ENSG00000105516 D 0.868
ENSMICG00000016323 Microcebus murinus ENSMICG00000016323 I 0.868
ENSMPUG00000003854 Mustela putorius furo ENSMPUG00000003854 I 0.868
ENSNLEG00000004551 Nomascus leucogenys ENSNLEG00000004551 I 0.868
ENSOARG00000011967 Ovis aries ENSOARG00000011967 I 0.868
DBP Otolemur garnettii ENSOGAG00000034399 I 0.868
ENSPANG00000015471 Papio anubis ENSPANG00000015471 I 0.868
Dbp Mus musculus ENSMUSG00000059824 D 0.868
DBP Pan troglodytes ENSPTRG00000011247 I 0.868
DBP Macaca mulatta ENSMMUG00000022160 I 0.868
Dbp Rattus norvegicus ENSRNOG00000021027 I 0.868
ENSFCAG00000030886 Felis catus ENSFCAG00000030886 I 0.868
DBP Myotis lucifugus ENSMLUG00000025433 I 0.868
DBP Gorilla gorilla ENSGGOG00000001444 I 0.868
DBP Cavia porcellus ENSCPOG00000019616 I 0.868
ENSP00000222122 Macaca fascicularis ENSP00000222122 I 0.868
DBP Dasypus novemcinctus ENSDNOG00000016868 I 0.868
ENSBTAP00000008883-D1 Bos grunniens ENSBTAP00000008883-D1 I 0.868
Myotis_brandtii_DBP_10017602 Myotis brandtii Myotis_brandtii_DBP_10017602 I 0.868
DBP Callithrix jacchus ENSCJAG00000000360 I 0.868
ENSAMEG00000014843 Ailuropoda melanoleuca ENSAMEG00000014843 I 0.868
DBP Bos taurus ENSBTAG00000006754 I 0.868
DBP Canis familiaris ENSCAFG00000003928 I 0.868
DBP Equus caballus ENSECAG00000014275 I 0.868
ENSCSAG00000002831 Chlorocebus sabaeus ENSCSAG00000002831 I 0.868
DBP Tursiops truncatus ENSTTRG00000008191 I 0.868
ENSTNIG00000008098 Tetraodon nigroviridis ENSTNIG00000008098 I 0.858
ENSTRUG00000003893 Takifugu rubripes ENSTRUG00000003893 I 0.858
ENSORLG00000011412 Oryzias latipes ENSORLG00000011412 I 0.858
ENSONIG00000012778 Oreochromis niloticus ENSONIG00000012778 I 0.858
Dbp Dipodomys ordii ENSDORG00000010599 I 0.855
ENSGACG00000010676 Gasterosteus aculeatus ENSGACG00000010676 I 0.841
ENSAMXG00000016053 Astyanax mexicanus ENSAMXG00000016053 I 0.832
ENSPFOG00000007430 Poecilia formosa ENSPFOG00000007430 I 0.831
ENSXMAG00000014158 Xiphophorus maculatus ENSXMAG00000014158 I 0.831
ENSAMXG00000009417 Astyanax mexicanus ENSAMXG00000009417 I 0.831
ENSONIG00000007041 Oreochromis niloticus ENSONIG00000007041 I 0.831
dbpa Danio rerio ENSDARG00000063014 I 0.831
ENSTRUG00000007098 Takifugu rubripes ENSTRUG00000007098 I 0.824
ENSTNIG00000004400 Tetraodon nigroviridis ENSTNIG00000004400 I 0.824
HHAL005759-PA Halyomorpha halys HHAL005759-PA I 0.799
ENSGMOG00000004797 Gadus morhua ENSGMOG00000004797 N 0.795
dbpb Danio rerio ENSDARG00000057652 N 0.795
ENSSHAG00000015304 Sarcophilus harrisii ENSSHAG00000015304 I 0.788
ENSPPYG00000008257 Pongo abelii ENSPPYG00000008257 I 0.788
ENSPFOG00000004560 Poecilia formosa ENSPFOG00000004560 I 0.788
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I 0.788
ENSSTOG00000029018 Ictidomys tridecemlineatus ENSSTOG00000029018 I 0.788
ENSBTAP00000008682-D1 Bos grunniens ENSBTAP00000008682-D1 I 0.788
ENSSARG00000013841 Sorex araneus ENSSARG00000013841 I 0.788
Myotis_brandtii_Hlf_10020713 Myotis brandtii Myotis_brandtii_Hlf_10020713 I 0.788
HLF Tupaia belangeri ENSTBEG00000006958 I 0.788
HLF Pteropus vampyrus ENSPVAG00000007461 I 0.788
ENSTSYG00000009210 Tarsius syrichta ENSTSYG00000009210 I 0.788
HLF Pan troglodytes ENSPTRG00000009424 I 0.788
HLF Tursiops truncatus ENSTTRG00000007194 I 0.788
ENSP00000226067 Macaca fascicularis ENSP00000226067 I 0.788
Hlf Rattus norvegicus ENSRNOG00000002456 I 0.788
HLF Otolemur garnettii ENSOGAG00000007056 I 0.788
ENSCPOG00000011000 Cavia porcellus ENSCPOG00000011000 I 0.788
ENSCSAG00000005557 Chlorocebus sabaeus ENSCSAG00000005557 I 0.788
HLF Loxodonta africana ENSLAFG00000016475 I 0.788
HLF Callithrix jacchus ENSCJAG00000011298 I 0.788
ENSMEUG00000016384 Macropus eugenii ENSMEUG00000016384 I 0.788
ENSLOCG00000012233 Lepisosteus oculatus ENSLOCG00000012233 I 0.788
HLF Gorilla gorilla ENSGGOG00000006075 I 0.788
ENSDORG00000012644 Dipodomys ordii ENSDORG00000012644 I 0.788
HLF Felis catus ENSFCAG00000022556 I 0.788
HLF Erinaceus europaeus ENSEEUG00000010964 I 0.788
HLF Homo sapiens ENSG00000108924 D 0.788
HLF Equus caballus ENSECAG00000016953 I 0.788
ENSPANG00000022360 Papio anubis ENSPANG00000022360 I 0.788
ENSMICG00000002860 Microcebus murinus ENSMICG00000002860 I 0.788
HLF Myotis lucifugus ENSMLUG00000007393 I 0.788
HLF Canis familiaris ENSCAFG00000030851 I 0.788
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I 0.788
HLF Bos taurus ENSBTAG00000006618 I 0.788
HLF Ochotona princeps ENSOPRG00000004195 I 0.788
ENSAMEG00000014714 Ailuropoda melanoleuca ENSAMEG00000014714 I 0.788
hlfa Oryzias latipes ENSORLG00000000969 I 0.788
HLF Oryctolagus cuniculus ENSOCUG00000010547 I 0.788
ENSCHOG00000001396 Choloepus hoffmanni ENSCHOG00000001396 I 0.788
HLF Monodelphis domestica ENSMODG00000014851 I 0.788
HLF Macaca mulatta ENSMMUG00000022627 I 0.788
ENSMPUG00000015400 Mustela putorius furo ENSMPUG00000015400 I 0.788
Hlf Mus musculus ENSMUSG00000003949 D 0.788
ENSNLEG00000007993 Nomascus leucogenys ENSNLEG00000007993 I 0.788
HLF Echinops telfairi ENSETEG00000017670 I 0.788
tefb Takifugu rubripes ENSTRUG00000003565 I 0.787
tefb Gasterosteus aculeatus ENSGACG00000007628 I 0.787
ENSLOCG00000011595 Lepisosteus oculatus ENSLOCG00000011595 I 0.787
Ogr00037 Ophisaurus gracilis Ogr00037 I 0.785
ENSPSIG00000016356 Pelodiscus sinensis ENSPSIG00000016356 I 0.785
Pvit_00680 Pogona vitticeps Pvit_00680 I 0.785
HLF Anolis carolinensis ENSACAG00000017417 I 0.785
ENSAPLG00000004386 Anas platyrhynchos ENSAPLG00000004386 I 0.785
Tal_R009182 Tyto alba Tal_R009182 I 0.785
ENSFALG00000002265 Ficedula albicollis ENSFALG00000002265 I 0.785
Gfo_R006518 Geospiza fortis Gfo_R006518 I 0.785
Brh_R008067 Buceros rhinoceros Brh_R008067 I 0.785
Afo_R002997 Aptenodytes forsteri Afo_R002997 I 0.785
Aan_R004902 Calypte anna Aan_R004902 I 0.785
ENSLACG00000012726 Latimeria chalumnae ENSLACG00000012726 I 0.785
Cmyd_10013489 Chelonia mydas Cmyd_10013489 I 0.785
HLF Taeniopygia guttata ENSTGUG00000009478 I 0.785
HLF Gallus gallus ENSGALG00000003059 I 0.785
ENSONIG00000019079 Oreochromis niloticus ENSONIG00000019079 I 0.784
tefb Oryzias latipes ENSORLG00000014144 I 0.783
ENSPFOG00000013950 Poecilia formosa ENSPFOG00000013950 I 0.783