Myotis_brandtii_JDP2_10012947 (Myotis brandtii)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Myotis_brandtii_JDP2_10012947 T070286_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
JDP2
M02836_2.00
Homo sapiens
ATGASTCAT

ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_1
0.945 1.000
JDP2
M02837_2.00
Homo sapiens
NRTGACGTCATB

VATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_2
0.945 1.000
JDP2
M02838_2.00
Homo sapiens
ATGASTCAT

ATGASTCAT
SELEX
Jolma et al.(2013)
JDP2_3
0.945 1.000
JDP2
M02839_2.00
Homo sapiens
NRTGACGTCATN

NATGACGTCAYN
SELEX
Jolma et al.(2013)
JDP2_4
0.945 1.000
JDP2
M04285_2.00
Homo sapiens
NATGASTCATV

BATGASTCATN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1
0.945 1.000
JDP2
M04286_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2
0.945 1.000
JDP2
M04289_2.00
Homo sapiens
NRTGMSKCAYN

NRTGMSKCAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1
0.945 1.000
JDP2
M04290_2.00
Homo sapiens
NRTKACRTMAYN

NRTKAYGTMAYN
SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2
0.945 1.000
JDP2
M04287_2.00
Homo sapiens
BATGASTCAYN

NRTGASTCATV
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1
0.945 1.000
JDP2
M04288_2.00
Homo sapiens
NRTGACRTCAYN

NRTGAYGTCAYN
SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2
0.945 1.000
JDP2
M04291_2.00
Homo sapiens
NRTGASTCAYN

NRTGASTCAYN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1
0.945 1.000
JDP2
M04292_2.00
Homo sapiens
NVTKACRTCAYN

NRTGAYGTMABN
SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2
0.945 1.000
Jdp2
M00125_2.00
Mus musculus
NRTGAYDNNN

NNNHRTCAYN
PBM
Badis et al.(2009)
Jundm2_0911
0.941 0.984
Jdp2
M01810_2.00
Mus musculus
NNTGACGYMW

WKRCGTCANN
PBM
Weirauch et al.(2014)
pTH5464
0.941 0.984
Jdp2
M02861_2.00
Mus musculus
ATGASTCAT

ATGASTCAT
SELEX
Jolma et al.(2013)
Jdp2_1
0.941 0.984
Jdp2
M02862_2.00
Mus musculus
VATGACGTCAYN

NRTGACGTCATB
SELEX
Jolma et al.(2013)
Jdp2_2
0.941 0.984
Jdp2
M10033_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$JDP2_03
0.941 0.984
Atf3
M00758_2.00
Mus musculus
NNRTKAYNN

NNRTMAYNN
PBM
Weirauch et al.(2013)
pTH2684
0.881 0.703
Atf3
M01807_2.00
Mus musculus
GATGACGY

RCGTCATC
PBM
Weirauch et al.(2014)
pTH5018
0.881 0.703
Atf3
M08825_2.00
Mus musculus
VTGACTCAB

VTGAGTCAB
Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A
0.881 0.703
Atf3
M03648_2.00
Drosophila melanogaster
NRTKACGTMAYN

NRTKACGTMAYN
SELEX
Nitta et al.(2015)
Atf3_1
0.825 0.562
ATF3
M04321_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX
0.786 0.391
ATF3
M04323_2.00
Homo sapiens
NRTGACGTCAYN

NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX
0.786 0.391
ATF3
M04032_2.00
Homo sapiens
RTGACGTCAK

MTGACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1
0.786 0.391
ATF3
M04033_2.00
Homo sapiens
RTGACTCAY

RTGAGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2
0.786 0.391
ATF3
M07822_2.00
Homo sapiens
VGTCACGTGRB

VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha
0.786 0.391
ATF3
M07823_2.00
Homo sapiens
VGTCACGTGRB

VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha
0.786 0.391
ATF3
M07824_2.00
Homo sapiens
VGTCACGTGRB

VYCACGTGACB
ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha
0.786 0.391
ATF3
M07825_2.00
Homo sapiens
VRTSACGTVR

YBACGTSAYB
ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard
0.786 0.391
ATF3
M08187_2.00
Homo sapiens
GTCACGTG

CACGTGAC
ChIP-seq
Contrino et al.(2012)
Mv41
0.786 0.391
ATF3
M08188_2.00
Homo sapiens
NRTGASTCAY

RTGASTCAYN
ChIP-seq
Contrino et al.(2012)
Mv43
0.786 0.391
ATF3
M08801_2.00
Homo sapiens
RRTSACGTVRB

VYBACGTSAYY
Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A
0.786 0.391
ATF3
M09489_2.00
Homo sapiens
NVTGASTCABNN

NNVTGASTCABN
Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912
0.786 0.391
ATF3
M09977_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_02
0.786 0.391
ATF3
M09978_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_05
0.786 0.391
ATF3
M09979_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6_01
0.786 0.391
ATF3
M09980_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6_02
0.786 0.391
ATF3
M09981_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF3_Q6
0.786 0.391
ATF3
M04322_2.00
Homo sapiens
NRTGACRTCAYH

DRTGAYGTCAYN
SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX
0.786 0.391
ATF3
M04324_2.00
Homo sapiens
NRTGACRTCAYH

DRTGAYGTCAYN
SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX
0.786 0.391
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_JDP2_10012947 bZIP 78 141

Links

Other bZIP family TFs
Other Myotis brandtii TFs

206 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.000
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.000
MDP0000155426 Malus domestica MDP0000155426 I 0.000
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.000
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.000
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.000
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.000
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.000
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.000
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.000
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.000
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.000
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.000
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.000
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.000
TCM_007865 Theobroma cacao TCM_007865 I 0.000
Lus10039772.g Linum usitatissimum Lus10039772.g N 0.000
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.000
PK24260.1 Cannabis sativa PK24260.1 N 0.000
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.000
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.000
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.000
MDP0000407613 Malus domestica MDP0000407613 N 0.000
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.000
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.000
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.000
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.000
Pm015302 Prunus mume Pm015302 N 0.000
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.000
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.000
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.000
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.000
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.000
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.000
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.000
MTR_0008s0470 Medicago truncatula MTR_0008s0470 N 0.000
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.000
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.000
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.000
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.000
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.000
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.000
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.000
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.000
Ca_22597 Cicer arietinum Ca_22597 N 0.000
GLYMA06G45531 Glycine max GLYMA06G45531 N 0.000