Lus10002399.g (Linum usitatissimum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Lus10002399.g T072005_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK18009.1
M01158_2.00
Cannabis sativa
NNACACGTGN

NCACGTGTNN
PBM
Lambert et al.(2019)
pTH10272
0.821 0.742
ABF4
M01056_2.00
Arabidopsis thaliana
NNMCACGTGKNN

NNMCACGTGKNN
PBM
Sullivan et al.(2014)
pTH7315
0.818 0.726
ABF4
M01057_2.00
Arabidopsis thaliana
NDMYAVNWNN

NNWNBTRKHN
PBM
Sullivan et al.(2014)
pTH7551
0.818 0.726
ABF4
M09911_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF4_Q2
0.818 0.726
ABF3
M01782_2.00
Arabidopsis thaliana
ACACGTGT

ACACGTGT
PBM
Weirauch et al.(2014)
pTH7240
0.809 0.613
ABF3
M09912_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF3_Q2
0.809 0.613
OS08G0471950
M10047_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TRAB1_Q2
0.802 0.677
ABF1
M01772_2.00
Arabidopsis thaliana
NNMCACGTGNN

NNCACGTGKNN
PBM
Weirauch et al.(2014)
pTH8837
0.800 0.677
ABF1
M01773_2.00
Arabidopsis thaliana
NMCACGTGKN

NMCACGTGKN
PBM
Weirauch et al.(2014)
pTH8853
0.800 0.677
ABF1
M02656_2.00
Arabidopsis thaliana
BBBBBBBBGCCACGTGDYC

GRHCACGTGGCVVVVVVVV
SELEX
Mathelier et al.(2014)
MA0570.1
0.800 0.677
ABF1
M09906_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_01
0.800 0.677
ABF1
M09907_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_02
0.800 0.677
ABF1
M09908_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ABF1_03
0.800 0.677
ABF2
M01771_2.00
Arabidopsis thaliana
NNYACGTGTHNNN

NNNDACACGTRNN
PBM
Weirauch et al.(2014)
pTH8103
0.793 0.806
ABF2
M06755_2.00
Arabidopsis thaliana
NNWNNTGMCACGTSWBMH

DKVWSACGTGKCANNWNN
Dap-seq
OMalley et al.(2016)
ABF2_col_v3a
0.793 0.806
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10002399 bZIP 239 300

Links

Other bZIP family TFs
Other Linum usitatissimum TFs

203 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29625.m000702 Ricinus communis 29625.m000702 I 0.793
29801.m003176 Ricinus communis 29801.m003176 I 0.804
30170.m013868 Ricinus communis 30170.m013868 I 0.821
AMTR_s00114p00031980 Amborella trichopoda AMTR_s00114p00031980 I 0.797
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I 0.818
Aquca_072_00142 Aquilegia coerulea Aquca_072_00142 I 0.782
ABF2 Arabidopsis thaliana AT1G45249 D 0.793
ABF1 Arabidopsis thaliana AT1G49720 D 0.800
ABI5 Arabidopsis thaliana AT2G36270 D 0.785
ABF4 Arabidopsis thaliana AT3G19290 D 0.818
ABF3 Arabidopsis thaliana AT4G34000 D 0.809
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.786
BGIOSGA005551 Oryza indica BGIOSGA005551 I 0.818
BGIOSGA028831 Oryza indica BGIOSGA028831 I 0.799
BGIOSGA030899 Oryza indica BGIOSGA030899 I 0.834
Bo1g007700 Brassica oleracea Bo1g007700 I 0.798
Bo1g114840 Brassica oleracea Bo1g114840 I 0.802
Bo3g073080 Brassica oleracea Bo3g073080 I 0.806
Bo5g115300 Brassica oleracea Bo5g115300 I 0.835
Bo6g006970 Brassica oleracea Bo6g006970 I 0.793
Bo6g018480 Brassica oleracea Bo6g018480 I 0.799
Bo7g116570 Brassica oleracea Bo7g116570 I 0.801
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I 0.837
Bostr.26675s0197 Boechera stricta Bostr.26675s0197 I 0.787
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I 0.809
Bra018800 Brassica rapa Bra018800 I 0.796
Bra022409 Brassica rapa Bra022409 I 0.835
Bra037533 Brassica rapa Bra037533 I 0.835
Bra040260 Brassica rapa Bra040260 I 0.793
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I 0.799
Cagra.10917s0002 Capsella grandiflora Cagra.10917s0002 I 0.789
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I 0.809
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I 0.832
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I 0.830
Carubv10006251m.g Capsella rubella Carubv10006251m.g I 0.809
Carubv10009177m.g Capsella rubella Carubv10009177m.g I 0.789
Carubv10009399m.g Capsella rubella Carubv10009399m.g I 0.789
Carubv10013729m.g Capsella rubella Carubv10013729m.g I 0.830
cassava11518.m1 Manihot esculenta cassava11518.m1 I 0.790
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I 0.821
cassava17300.m1 Manihot esculenta cassava17300.m1 I 0.797
cassava32856.m1 Manihot esculenta cassava32856.m1 I 0.788
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I 0.821
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I 0.814
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I 0.814
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I 0.814
Ca_01548 Cicer arietinum Ca_01548 I 0.819
Ca_06458 Cicer arietinum Ca_06458 I 0.790
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I 0.819
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I 0.842
Cla016272 Citrullus lanatus Cla016272 I 0.836
Cla022926 Citrullus lanatus Cla022926 I 0.798
Cucsa.219780 Cucumis sativus Cucsa.219780 I 0.836
Cucsa.396070 Cucumis sativus Cucsa.396070 I 0.803
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I 0.821
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I 0.792
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I 0.806
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I 0.819
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I 0.827
F775_32479 Aegilops tauschii F775_32479 I 0.784
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I 0.793
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I 0.825
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I 0.830
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I 0.809
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I 0.805
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I 0.833
GLYMA04G04170 Glycine max GLYMA04G04170 I 0.819
GLYMA06G04353 Glycine max GLYMA06G04353 I 0.819
GLYMA07G33600 Glycine max GLYMA07G33600 I 0.805
GLYMA13G22061 Glycine max GLYMA13G22061 I 0.790
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I 0.813
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I 0.826
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I 0.812
Gorai.009G212600 Gossypium raimondii Gorai.009G212600 I 0.814
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.814
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I 0.825
GRMZM2G002075 Zea mays GRMZM2G002075 I 0.814
GRMZM2G033413 Zea mays GRMZM2G033413 I 0.783
GRMZM2G157722 Zea mays GRMZM2G157722 I 0.823
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.786
GRMZM2G478417 Zea mays GRMZM2G478417 I 0.823
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I 0.805
GSMUA_Achr3G22710_001 Musa acuminata GSMUA_Achr3G22710_001 I 0.803
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I 0.811
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I 0.793
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I 0.789
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I 0.824
GSMUA_Achr8G07740_001 Musa acuminata GSMUA_Achr8G07740_001 I 0.801
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I 0.840
LjT07K13.110.nd Lotus japonicus LjT07K13.110.nd I 0.799
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.786
LPERR02G27610 Leersia perrieri LPERR02G27610 I 0.788
LPERR08G14740 Leersia perrieri LPERR08G14740 I 0.799
LPERR09G09170 Leersia perrieri LPERR09G09170 I 0.839
Lus10006489.g Linum usitatissimum Lus10006489.g I 0.795
Lus10009755.g Linum usitatissimum Lus10009755.g I 0.788
Lus10014066.g Linum usitatissimum Lus10014066.g I 0.813
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.795
Lus10017049.g Linum usitatissimum Lus10017049.g I 0.801
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.795
Lus10027897.g Linum usitatissimum Lus10027897.g I 0.823
MDP0000248567 Malus domestica MDP0000248567 I 0.825
MDP0000296303 Malus domestica MDP0000296303 I 0.805
MDP0000701734 Malus domestica MDP0000701734 I 0.788
mgf002047m Mimulus guttatus mgf002047m I 0.835
mgf002176m Mimulus guttatus mgf002176m I 0.791
mgf007524m Mimulus guttatus mgf007524m I 0.835
mgf014602m Mimulus guttatus mgf014602m I 0.835
mgf020824m Mimulus guttatus mgf020824m I 0.797
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.784
MLOC_66546 Hordeum vulgare MLOC_66546 I 0.820
MTR_3g101780 Medicago truncatula MTR_3g101780 I 0.817
MTR_4g085910 Medicago truncatula MTR_4g085910 I 0.790
OB01G46760 Oryza brachyantha OB01G46760 I 0.786
OB02G40680 Oryza brachyantha OB02G40680 I 0.796
OB08G24950 Oryza brachyantha OB08G24950 I 0.798
OB09G19140 Oryza brachyantha OB09G19140 I 0.816
OBART01G37980 Oryza barthii OBART01G37980 I 0.786
OBART02G33770 Oryza barthii OBART02G33770 I 0.792
OBART08G17810 Oryza barthii OBART08G17810 I 0.783
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.786
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I 0.818
OGLUM08G18640 Oryza glumaepatula OGLUM08G18640 I 0.802
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I 0.834
OLONG_000475 Oryza longistaminata OLONG_000475 I 0.792
OLONG_001053 Oryza longistaminata OLONG_001053 I 0.808
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.786
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.786
OMERI02G32150 Oryza meridionalis OMERI02G32150 I 0.818
OMERI09G10130 Oryza meridionalis OMERI09G10130 I 0.834
ONIVA02G33490 Oryza nivara ONIVA02G33490 I 0.818
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.786
ONIVA08G19830 Oryza nivara ONIVA08G19830 I 0.792
OPUNC08G15700 Oryza punctata OPUNC08G15700 I 0.799
OPUNC09G11090 Oryza punctata OPUNC09G11090 I 0.834
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I 0.842
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I 0.827
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I 0.819
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.786
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I 0.814
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I 0.799
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I 0.834
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.786
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I 0.818
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I 0.799
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I 0.782
OS01G0859300 Oryza sativa OS01G0859300 I 0.786
BZIP23 Oryza sativa OS02G0766700 I 0.818
BZIP46 Oryza sativa OS06G0211200 I 0.782
OS08G0471950 Oryza sativa OS08G0471950 D 0.802
OS09G0456200 Oryza sativa OS09G0456200 I 0.834
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I 0.816
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I 0.783
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I 0.841
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I 0.813
Pavir.J00256 Panicum virgatum Pavir.J00256 I 0.802
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.786
PGSC0003DMG400002660 Solanum tuberosum PGSC0003DMG400002660 I 0.783
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.822
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I 0.823
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I 0.828
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I 0.818
PK02169.1 Cannabis sativa PK02169.1 I 0.821
PK18009.1 Cannabis sativa PK18009.1 D 0.821
Pm005288 Prunus mume Pm005288 I 0.784
Pm021430 Prunus mume Pm021430 I 0.831
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I 0.821
ABI5 Populus trichocarpa POPTR_0006s08300 I 0.786
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I 0.819
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I 0.821
PRUPE_ppa006503mg Prunus persica PRUPE_ppa006503mg I 0.799
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I 0.831
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I 0.822
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I 0.833
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I 0.821
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I 0.833
Sb04g034190 Sorghum bicolor Sb04g034190 I 0.797
Sb06g026410 Sorghum bicolor Sb06g026410 I 0.800
Sb07g022965 Sorghum bicolor Sb07g022965 I 0.826
Sb08g003760 Sorghum bicolor Sb08g003760 I 0.794
Si006889m.g Setaria italica Si006889m.g I 0.783
Si013904m.g Setaria italica Si013904m.g I 0.840
Si017618m.g Setaria italica Si017618m.g I 0.797
Si030114m.g Setaria italica Si030114m.g I 0.829
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I 0.818
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I 0.820
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I 0.807
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I 0.828
TCM_007074 Theobroma cacao TCM_007074 I 0.825
TCM_033824 Theobroma cacao TCM_033824 I 0.827
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I 0.799
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I 0.824
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I 0.835
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I 0.812
TRAES3BF099600130CFD_g Triticum aestivum TRAES3BF099600130CFD_g I 0.784
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.784
TRAES3BF111600160CFD_g Triticum aestivum TRAES3BF111600160CFD_g I 0.788
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.784
TRIUR3_26781 Triticum urartu TRIUR3_26781 I 0.811
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.796
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I 0.799
DPBF2 Vitis vinifera VIT_06s0080g00340 I 0.783
ABF2 Vitis vinifera VIT_18s0001g10450 I 0.822