Lus10013059.g (Linum usitatissimum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Lus10013059.g T072036_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATBZIP42
M06775_2.00
Arabidopsis thaliana
TGCTGACGTGGM

KCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_col_a
0.832 0.803
ATBZIP42
M06776_2.00
Arabidopsis thaliana
TGCTGACGTGGCV

BGCCACGTCAGCA
Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a
0.832 0.803
OS02G0266800
M10046_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RITA1_01
0.815 0.508
OS02G0728001
M01826_2.00
Oryza sativa
NHCACGTGKNN

NNMCACGTGDN
PBM
Weirauch et al.(2014)
pTH8334
0.792 0.705
OS02G0728001
M01827_2.00
Oryza sativa
WSACGTGG

CCACGTSW
PBM
Weirauch et al.(2014)
pTH8737
0.792 0.705
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10013059 bZIP 97 157

Links

Other bZIP family TFs
Other Linum usitatissimum TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cla019717 Citrullus lanatus Cla019717 N 0.000
Cucsa.086300 Cucumis sativus Cucsa.086300 N 0.000
Cucsa.086310 Cucumis sativus Cucsa.086310 N 0.000
Cucsa.086330 Cucumis sativus Cucsa.086330 N 0.000
PGSC0003DMG400019263 Solanum tuberosum PGSC0003DMG400019263 I 0.000