CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
LPERR11G03390
(
Leersia perrieri
)
bZIP,GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
PF03514 (GRAS)
IPR011616
IPR005202
LPERR11G03390
T075570_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27109.1
M01163_2.00
Cannabis sativa
KACAGCTR
YAGCTGTM
PBM
Lambert et al.(2019)
pTH10158
0.841
0.903
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR11G03390.1
bZIP
158
219
DPKRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSTQLTLLQRDTSGLTAENR
LPERR11G03390.1
GRAS
343
511
LSDLLLAGAEAVEAGDPILASVVFSRLDDFLLSQIPENAAASSFDRLAYHFDQGLRSRVSSACTGCYQPEPPPSGNMVVHQIIQELSPFVKFAHFTTNQAILDATVGDMDVHVVDLNIGEGIQWSSFMSDLARRGGKSFILTAIMAYADCKDSTHDTAVRLLSEFASVL
LPERR11G03390.1
GRAS
504
659
LSEFASVLLGCVKKLQPKLVVIVEDDLVRIGRGAPPSSASFVDFFFEALHHFTMLFESFLSCFSYGNYEACVRLVETELVGPRIQDFVGEYRSVRIETNACKVLEGFKACELSACNIAQARMLVGLFNRVFGVVFEKGRLALCWKSRPLISVSVWA
LPERR11G03390.2
bZIP
158
219
DPKRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSTQLTLLQRDTSGLTAENR
LPERR11G03390.2
GRAS
343
511
LSDLLLAGAEAVEAGDPILASVVFSRLDDFLLSQIPENAAASSFDRLAYHFDQGLRSRVSSACTGCYQPEPPPSGNMVVHQIIQELSPFVKFAHFTTNQAILDATVGDMDVHVVDLNIGEGIQWSSFMSDLARRGGKSFILTAIMAYADCKDSTHDTAVRLLSEFASVL
LPERR11G03390.2
GRAS
504
659
LSEFASVLLGCVKKLQPKLVVIVEDDLVRIGRGAPPSSASFVDFFFEALHHFTMLFESFLSCFSYGNYEACVRLVETELVGPRIQDFVGEYRSVRIETNACKVLEGFKACELSACNIAQARMLVGLFNRVFGVVFEKGRLALCWKSRPLISVSVWA
LPERR11G03390.3
bZIP
158
219
DPKRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSTQLTLLQRDTSGLTAENR
Links
Other
bZIP,GRAS
family TFs
Other
Leersia perrieri
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy