CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene24036-v1.0-hybrid
(
Fragaria vesca
)
bZIP,HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
PF00447 (HSF_DNA-bind)
IPR011616
IPR000232
gene24036-v1.0-hybrid
T075595_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna24036.1-v1.0-hybrid
HSF
10
100
FLMKTFQLVDDPASDDVISWNESGTAFVVWKTVDFARDMLPNYFKHNNFSSFVRQLNTYGFRKTVPDKWEFANDNFRRGEKELLSEIRRRK
mrna24036.1-v1.0-hybrid
bZIP
151
187
HTADLSDENEKLKKDNETLSSELAQTKKQCDELVAFL
Links
Other
bZIP,HSF
family TFs
Other
Fragaria vesca
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000254208
Malus domestica
MDP0000254208
N
0.879
PRUPE_ppa009274mg
Prunus persica
PRUPE_ppa009274mg
N
0.879
Pm026366
Prunus mume
Pm026366
N
0.871
TCM_000610
Theobroma cacao
TCM_000610
N
0.863
Gorai.003G023500
Gossypium raimondii
Gorai.003G023500
N
0.855
cassava6733.valid.m1
Manihot esculenta
cassava6733.valid.m1
N
0.855
Ca_02146
Cicer arietinum
Ca_02146
N
0.758