CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZEB1
(
Ochotona princeps
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ENSOPRG00000007291
T075951_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZEB1
M08080_2.00
Homo sapiens
NNCACCTGBNN
NNVCAGGTGNN
ChIP-seq
Mathelier et al.(2014)
MA0103.3
0.702
0.702
ZEB1
M07842_2.00
Homo sapiens
YNCACCTG
CAGGTGNR
ChIP-seq
Gerstein et al.(2012)
GM12878_ZEB1_HudsonAlpha
0.702
0.702
ZEB1
M08190_2.00
Homo sapiens
CVCWCACCTG
CAGGTGWGBG
ChIP-seq
Contrino et al.(2012)
Mv136
0.702
0.702
ZEB1
M08848_2.00
Homo sapiens
YHYACCTGBV
BVCAGGTRDR
Misc
Kulakovskiy et al.(2013)
ZEB1_HUMAN.H11MO.0.A
0.702
0.702
ZEB1
M10089_2.00
Homo sapiens
NHYDYACCTGWVY
RBWCAGGTRHRDN
Transfac
Matys et al.(2006)
V$AREB6_01
0.702
0.702
ZEB1
M10090_2.00
Homo sapiens
WHWCACCTKWNN
NNWMAGGTGWDW
Transfac
Matys et al.(2006)
V$AREB6_02
0.702
0.702
ZEB1
M10091_2.00
Homo sapiens
VBRCACCTGKDV
BHMCAGGTGYVB
Transfac
Matys et al.(2006)
V$AREB6_03
0.702
0.702
ZEB1
M10092_2.00
Homo sapiens
NNSAAACVB
VBGTTTSNN
Transfac
Matys et al.(2006)
V$AREB6_04
0.702
0.702
ZEB1
M10093_2.00
Homo sapiens
NHNCACCTDRV
BYHAGGTGNDN
Transfac
Matys et al.(2006)
V$DELTAEF1_01
0.702
0.702
ZEB1
M10094_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB1_03
0.702
0.702
ZEB1
M10095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZEB_Q3
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000006680
C2H2 ZF
162
185
LTCPYCDRGYKRFTSLKEHIKYRH
ENSOPRP00000006680
C2H2 ZF
192
214
FSCSLCSYTFAYRTQLERHMTSH
ENSOPRP00000006680
C2H2 ZF
260
281
YECPNCKKRFSHSGSYSSHISS
ENSOPRP00000006680
Homeodomain
578
626
HPPLKNLLSLLKAYYALNAQPSAEELAKIADSVNLPLDVVKKWFEKMQA
ENSOPRP00000006680
C2H2 ZF
896
918
YACDLCDKIFQKSSSLLRHKYEH
ENSOPRP00000006680
C2H2 ZF
924
946
HECGICKKAFKHKHHLIEHMRLH
ENSOPRP00000006680
C2H2 ZF
952
970
YQCDKCGKRFSHGSYSQHM
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Ochotona princeps
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy