CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cflo_00361--XP_393785.3_APIME
(
Camponotus floridanus
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
Cflo_00361--XP_393785.3_APIME
T076226_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFHX3
M10088_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AFP1_Q6
0.706
0.706
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
455
478
LKCPKCNWHYKYQETLEIHMKEKH
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
510
534
YRCEVCNYSTTTKGNLSIHMQSDKH
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
591
615
FRCDVCNYETNVARNLRIHMTSEKH
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
1131
1154
TVCTVCGRTYRSPEDLQQHHRENH
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
1171
1193
YRCGQCSLAFKTLEKVQQHSQYH
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
1199
1222
TKCTLCGRSFRSVQALQRHLESTH
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
1310
1334
FKCHRCKVAFTRQSYLTGHNKTLLH
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
1354
1378
YKCDVCKESFTQKNILLVHYNSVSH
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
1420
1444
YKCNICKVAYTQGSTLDIHMRSVLH
Cflo_00361--XP_393785.3_APIME
Homeodomain
1913
1969
KRARTRITDEQLKILRKNFDINNSPGEEQIIEMAGQSGLPPKVIKHWFRNTLFKERQ
Cflo_00361--XP_393785.3_APIME
Homeodomain
2174
2230
RANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIVVWFQNARQKARK
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
2263
2285
YQCKKCLLVFQRYYELIRHQKTH
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
2388
2410
YQCEKCNLVFGRFELWREHQLVH
Cflo_00361--XP_393785.3_APIME
Homeodomain
2482
2538
KRLRTTILPEQLDYLYQKYQIESNPSRKMLETIAREVGLKKRVVQVWFQNTRARERK
Cflo_00361--XP_393785.3_APIME
C2H2 ZF
2550
2573
KRCPFCPALFKVKSALESHLSSKH
Cflo_00361--XP_393785.3_APIME
Homeodomain
2775
2831
KRYRTQMSGTQVKVMKSLFSDYKTPTMAECEMLGREIGLPKRVVQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Camponotus floridanus
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy