CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pvit_09644
(
Pogona vitticeps
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
Pvit_09644
T076257_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_09644
C2H2 ZF
548
571
LKCPKCNWHYKYQQTLDVHMKEKH
Pvit_09644
C2H2 ZF
603
627
YRCEACNYSTTTKGNLSIHMQSDKH
Pvit_09644
C2H2 ZF
668
692
WQCKVCSYETNISRNLRIHMTSEKH
Pvit_09644
C2H2 ZF
1264
1288
YKCTVCKESFTQKNILLVHYNSVSH
Pvit_09644
C2H2 ZF
1321
1345
YKCTTCRVSYNQSSTLEIHMRSVLH
Pvit_09644
Homeodomain
1704
1760
RFSRTKFTEFQSQALQSFFESSAYPKDGEVERLSSLLSLPNRVIVVWFQNARQKARK
Pvit_09644
C2H2 ZF
1869
1891
HPCDQCTAKFSSSDLLSIHRVNH
Pvit_09644
Homeodomain
1958
2014
KRLRTTILPEQLEILYRWYMQDSNPTRKMLDCISEEVGLKKRVVQVWFQNTRARERK
Pvit_09644
Homeodomain
2141
2197
RRYRTQMSSLQLKIMKACYEAYRTPTMQECEVLGEEIGLPKRVIQVWFQNARAKEKK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Pogona vitticeps
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy