CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_17_chr8_1_0000039
(
Nectria haematococca
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
fgenesh1_pm.sca_17_chr8_1_0000039
T076276_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_17_chr8_1_0000039
Homeodomain
25
79
GRFTREAVRVLRNWLATHQSHPYPRDSERRMLQEQTGLTKTQISNWLANARRRGK
fgenesh1_pm.sca_17_chr8_1_0000039
C2H2 ZF
212
235
FQCTFCTETFRAKHDWQRHENSLH
fgenesh1_pm.sca_17_chr8_1_0000039
C2H2 ZF
279
303
CRNRPIQERTFNRKDHLNQHLRLVH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Nectria haematococca
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy