CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_18_chr2_1_0000528
(
Nectria haematococca
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
fgenesh1_pm.sca_18_chr2_1_0000528
T076277_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_18_chr2_1_0000528
Homeodomain
202
257
ARFSRESVRILKNWLSTHNRHPYPSDEEKEILQRQTGLNKTQITNWLANARRRGKV
fgenesh1_pm.sca_18_chr2_1_0000528
C2H2 ZF
413
436
FQCTFCTETFRTKHDWQRHEKSLH
fgenesh1_pm.sca_18_chr2_1_0000528
C2H2 ZF
482
506
CQERSPEERTFYRKDHLNQHLRLVH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Nectria haematococca
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy