CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nOo.2.0.1.g04264
(
Onchocerca ochengi
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
nOo.2.0.1.g04264
T076394_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nOo.2.0.1.t04264-RA
Homeodomain
169
225
LRSRSFLTDAQVAVLHAHFKRNPFPSKYELSAVAEQIGVNKRVVQVWFQNTRAKERR
nOo.2.0.1.t04264-RA
C2H2 ZF
468
490
YACDQCDKMFGKQSSLARHKYEH
nOo.2.0.1.t04264-RA
C2H2 ZF
496
518
YKCDVCEKAFKHKHHLTEHKRLH
nOo.2.0.1.t04264-RA
C2H2 ZF
524
545
FQCDKCLKRFSHSGSYSQHMNH
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Onchocerca ochengi
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nLs.2.1.2.g09067
Litomosoides sigmodontis
nLs.2.1.2.g09067
N
0.992
Bm3681
Brugia malayi
Bm3681
N
0.992
TELCIR_15558
Teladorsagia circumcincta
TELCIR_15558
N
0.968
RSKR_0000829000
Rhabditophanes kr3021
RSKR_0000829000
N
0.888
WBGene00241636
Onchocerca volvulus
WBGene00241636
N
0.850
HCOI00581300
Haemonchus contortus
HCOI00581300
N
0.816
GPLIN_000168700
Globodera pallida
GPLIN_000168700
N
0.800
nDi.2.2.2.g01416
Dirofilaria immitis
nDi.2.2.2.g01416
N
0.735
LOAG_17507
Loa loa
LOAG_17507
N
0.729
ASU_02713
Ascaris suum
ASU_02713
N
0.718
EVEC_0000655901
Enterobius vermicularis
EVEC_0000655901
N
0.706
HPLM_0000501901
Haemonchus placei
HPLM_0000501901
N
0.706